Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3134 ATGAACGGTCCAAACGGCAACAACCCACCACCACCCCACATCCTGGTGGTTCCGTTCCCATCACAGGGCCACATGATACCCCTCTTAGACCTAACCCACAAGCTAGCCTCCACCGACACCGCCATCACCATCACCATTCTCACCACCCCAAAGAACCTCACCTTCCTCGACCCTCTCCTCTCTTCTTTCTCAGCCATCATCCACCCCTTGGTCCTCCCCTTACCTTCCCACCCATCCCTCCCTCCGGGCGTAGAAAACTCCAAAGGCATGCCAACCTCCGTGCCTTCCCTCATGCTTTCTTTCTCCAACCTCTACAACCCTCTCCTCCACTGGTTCCACTCCCACCCTTCCCCTCCTCAACTCATCATCTCCGACATGTTCTCCGGCTGGACTCAAAACCTCGCCACCCACCTCAACATTCGCAGAATCGTCTTTTCCCCTTCTGGATCCTTCGCTCTCTCCGCCATATACTTCCTCTGGGCCCATGTCCCCAACCGCCAAAACCCTAACGATCAAAACGAACTCGTTTCCTTCCACACCCTCCCGAATTCCCCAAAATACCCCTGGTGGCAGGTCTCGCCGTTGTTCCGAAGATATGCATCGGGTGTCCCCGGTTCGGAGCATTTTAGGGATTGGTTCCTCGCGAACATAGCCAGTTGGGGACTCGTTATTAACTCGTTCAACGAGTTGGAGAAGCCATATCTTGAACACCTAAAGAAGGAGCTTCGCCATGATCGCGTTTGGGCGGTTGGACCGTTACTTCCAGATCCGGAAGGCCTAAACCAAAAGAACTCGTCGTTTATCTCAGAAAGAGGAGGAACTAGTTCTGTTCCCATAAACGACGTCGTTTCGTGGCTTGATAAGCGAAACCGCCGCGAGGTGGTGTATTTGTGTTTTGGAAGCCAGGTTGTGCTTTCGGTGGAACAGACAGTCGCGATTGGTTCAGCTTTGGAGAAAAGTGGGGTCCACTTCGTGTGGTCGGTAAAAGAAGGTGGGGATGATCGGTGCGTTGATTTCATGTCTGGGTTTGAGGACAGGATGGCTGGGAGGGGTTTAGTTATAAGGGGTTGGGCCCCGCAAGTTGTGATACTCAGACACGTGGCGGTTGGGGCGTTTGTCAGTCACTGCGGGTGGAACTCGGTGATGGAATCGGTCGTTGCCGGTGTGCCGGTGCTGGCGTGGCCTATGTCTGCGGACCAATTTGTGGATGCTACGCTGCTTGTGGAGGAGTTGAAGGTGGCCAAGACGGTGTGTGAAGGGGACAGAGCAGTTCCTGACTCGGATGAGTTTGCCCGAGTTTTGGCGGAGACGGTGAATGTACGCGATAACCCGGAGGCAACTCGGGCGCTGAAGCTTCGGGAAGCGGCGCTTCAGTCTATTCGAGAAGGGGGAAGCTCTGAGAAGGATTTGAGGAGCTTGGTTGGGAAAATTCATAGCTTGGTTTAA 1446 0.5422 MNGPNGNNPPPPHILVVPFPSQGHMIPLLDLTHKLASTDTAITITILTTPKNLTFLDPLLSSFSAIIHPLVLPLPSHPSLPPGVENSKGMPTSVPSLMLSFSNLYNPLLHWFHSHPSPPQLIISDMFSGWTQNLATHLNIRRIVFSPSGSFALSAIYFLWAHVPNRQNPNDQNELVSFHTLPNSPKYPWWQVSPLFRRYASGVPGSEHFRDWFLANIASWGLVINSFNELEKPYLEHLKKELRHDRVWAVGPLLPDPEGLNQKNSSFISERGGTSSVPINDVVSWLDKRNRREVVYLCFGSQVVLSVEQTVAIGSALEKSGVHFVWSVKEGGDDRCVDFMSGFEDRMAGRGLVIRGWAPQVVILRHVAVGAFVSHCGWNSVMESVVAGVPVLAWPMSADQFVDATLLVEELKVAKTVCEGDRAVPDSDEFARVLAETVNVRDNPEATRALKLREAALQSIREGGSSEKDLRSLVGKIHSLV* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3134 481 Gene3D Glycogen Phosphorylase B; 280 461 - -
Amo20g3134 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 291 406 IPR002213 GO:0008194
Amo20g3134 481 Gene3D Glycogen Phosphorylase B; 13 466 - -
Amo20g3134 481 CDD GT1_Gtf-like 13 457 IPR002213 GO:0008194
Amo20g3134 481 PANTHER UDP-GLYCOSYLTRANSFERASE 89A2 10 479 - -
Amo20g3134 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 477 - -
Amo20g3134 481 PANTHER GLYCOSYLTRANSFERASE 10 479 - -
Amo20g3134 481 ProSitePatterns UDP-glycosyltransferases signature. 357 400 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3134 Amo-Chr20 135947192 135949153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3134 7 480 Glycosyltransferase AT1G73880 53.556 2.02e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3134 - - cam:101508036 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3134 20 135947192 135949153 Amo20g3134 20 135947192 135949153 ECH