Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3071 ATGGTTTTCTGGGTTTTTGGCTACGGTTCACTTGTGTGGAACCCAGGATTCGAATTCGATGAGAAAATTATCGGCTACATTAAGGATTACAGACGTGTATTTGATTTAGCATGCATTGATCACCGGGGTACACCTGAAAGCCCTGCAAGAACTTGCACGTTAGAGGAGAAAGAAGGAGCAATTTGCTGGGGTGCTGCTTATTGTGTTAAAGGTGGCGCTGAGAAGGAAAAATTTGCTATGCAGTATTTGGAAAGGCGAGAATGTGAATATGATCAAAAGACTCTCGTAAACTTCTACAAGGAAGGAGAGACACTTCAACCTGCTTTAACGGGAGTGATAGTATTTACATCTACGCCGGATAAAATTAACAACAAATACTACCTGGGACCTGCCCCTCTTGAAGACATGGCTAGGCAAATAGCAACTGCCTATGGTCCTTGCGGAAACAACAGGGATTATCTTTTCCTTTTGGAGAAGGCCATGTACGATATTGCCCACGAAGATGACTATGTAATAGAGCTAGCTAATGAAGTAAGGAAAGTACTTGGAATGGGGAAGGCACTACCAAAGGACAAAAAGTTGGTTGGAGCAACATCACAACTTCAACACCCTCCTCATGTACCTATTCCAACCCTTCAGCTTCATCCTCTTCCAGAACCCATTGCTTTGGATAGCTGA 678 0.4336 MVFWVFGYGSLVWNPGFEFDEKIIGYIKDYRRVFDLACIDHRGTPESPARTCTLEEKEGAICWGAAYCVKGGAEKEKFAMQYLERRECEYDQKTLVNFYKEGETLQPALTGVIVFTSTPDKINNKYYLGPAPLEDMARQIATAYGPCGNNRDYLFLLEKAMYDIAHEDDYVIELANEVRKVLGMGKALPKDKKLVGATSQLQHPPHVPIPTLQLHPLPEPIALDS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3071 225 CDD GGCT_like 5 110 IPR013024 -
Amo20g3071 225 Gene3D - 2 176 - -
Amo20g3071 225 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 225 - -
Amo20g3071 225 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 225 IPR006840 GO:0003839|GO:0006751
Amo20g3071 225 Pfam ChaC-like protein 4 180 IPR006840 GO:0003839|GO:0006751
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3071 Amo-Chr20 134492993 134496117 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3071 K22596 - gmx:100778704 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3071 20 134492993 134496117 Amo20g3071 20 134492993 134496117 ECH
Amo10g2490 10 86770441 86772282 Amo20g3071 20 134492993 134496117 hybridization