Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3066 ATGACGAATTCTGTGGTGAGAGCGAGGCACGACGTGTTCGTGTATGGCAGCCTCTTAGCCGATGAGGTTGTTCGTGTCCTCTTGAATCGCGTCCCTTCTTCAACCCCTGCCACTCTCCATGGCTATCACAGGTTTAAAATCAAAGGTCGCGTTTATCCCGCTATTCTCCCTGTGGAGAATAAGAAAGTTACTGGCAGGGTCCTTCATGAGATCACAGGAGTGGAGTTGGATATCTTAGACGAATTCGAGGATGTTGAATATAATAGAAGTGATGCTGAGGTTGTATTGATGGACACTTCTGAGAAGTTACAAGTTCACACTTATGTTTGGAGTGACCCAAACGATCCAAATTTATATGGAGAGTGGGATTTTGAGGAATGGAAACAAGTTCACATGAATGATTTTCTCAAGATGACCGATGCTTTCATGCGTGAATCAGAGCAAGACTCAGAGTTGCAAGAATCAAAGACAAGAGTTCAAACCTATGAATCTTTCTATAAGCAAGAAAATGATAAGCAATCCTCATGA 528 0.428 MTNSVVRARHDVFVYGSLLADEVVRVLLNRVPSSTPATLHGYHRFKIKGRVYPAILPVENKKVTGRVLHEITGVELDILDEFEDVEYNRSDAEVVLMDTSEKLQVHTYVWSDPNDPNLYGEWDFEEWKQVHMNDFLKMTDAFMRESEQDSELQESKTRVQTYESFYKQENDKQSS* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3066 175 PANTHER AIG2-LIKE PROTEIN 6 149 - -
Amo20g3066 175 Gene3D - 117 170 - -
Amo20g3066 175 CDD GGCT_like 12 110 IPR013024 -
Amo20g3066 175 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 12 123 IPR009288 -
Amo20g3066 175 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 10 133 IPR036568 -
Amo20g3066 175 Gene3D - 2 116 - -
Amo20g3066 175 PANTHER AIG2-LIKE PROTEIN D 6 149 IPR045038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3066 Amo-Chr20 134383857 134385588 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3066 - - gmx:100527521 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2483 10 86736555 86738664 Amo20g3066 20 134383857 134385588 hybridization