Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3046 ATGCCAGAGACTGAGGTAAAAGCAACTATCAGCAAGTCAACTGGTTTGCCACGAAAGCGCTTCTACCGAGCACGAGCACACAGCAATCCACTGAGTGACTCTCACTTCCCTGTGCCAATATCCCCCAGTCAGTTTGACTATTCCCTCCATTACCCTCAGATCTTTCCATCGTCTGATCAAGCCGATGGTTCTAGAAAGATCCAGTTTGCTGATATTGGCTGTGGTTTTGGAGGGCTGCTCATTAGTCTTTCAACACTTTTCCCAGAAACACTGATGATTGGAATGGAGCTTAGAGATAAAGTGACTGAGTATGTCAAGGAACGGATTCTATCTCTAAGGGTAGCAAATCCAGGTCAATACCAAAATGTTTCTGTGGTGCGGACTAACTCAATGAAGTACATTCCTAATTATTTTGAGAAAGCACAGCTCACAAAGATGTTTTTCTTGTTTCCTGATCCTCATTTTAAAGAGAAGAATCACCGCCGAAGGGTTATCAGCCCATTCTTGCTAGATGAATATGCTTATGTTCTTAAGGCTGGTGGAATTATATACACAATTACAGATGTTGAAGAGCTTGGGGACTGGATGAAATCTTGTCTGGAGAATCACCCCATGTTTGAAGCCTTGACTGAGAAAGAACTTGAAGCAGATCCAGTTGTGAAGCTTTTGAGTTCTGCAACTGAAGAAGGTCAAAAAGTTGCAAGAAATGGGGGGCAAACCTTCCAGGCCGTATTCAGGCGCATTGTGCCATCTGATAAAACTTCATAA 768 0.431 MPETEVKATISKSTGLPRKRFYRARAHSNPLSDSHFPVPISPSQFDYSLHYPQIFPSSDQADGSRKIQFADIGCGFGGLLISLSTLFPETLMIGMELRDKVTEYVKERILSLRVANPGQYQNVSVVRTNSMKYIPNYFEKAQLTKMFFLFPDPHFKEKNHRRRVISPFLLDEYAYVLKAGGIIYTITDVEELGDWMKSCLENHPMFEALTEKELEADPVVKLLSSATEEGQKVARNGGQTFQAVFRRIVPSDKTS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3046 255 Pfam Putative methyltransferase 68 242 IPR003358 GO:0006400|GO:0008176
Amo20g3046 255 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 9 249 IPR025763 GO:0008176
Amo20g3046 255 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 9 249 IPR003358 GO:0006400|GO:0008176
Amo20g3046 255 CDD AdoMet_MTases 69 186 - -
Amo20g3046 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 242 IPR029063 -
Amo20g3046 255 Gene3D Vaccinia Virus protein VP39 45 247 IPR029063 -
Amo20g3046 255 Hamap tRNA (guanine-N(7)-)-methyltransferase [METTL1]. 16 248 IPR025763 GO:0008176
Amo20g3046 255 TIGRFAM TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 65 248 IPR003358 GO:0006400|GO:0008176
Amo20g3046 255 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 19 247 IPR003358 GO:0006400|GO:0008176
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3046 Amo-Chr20 133901019 133903325 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3046 K03439 - gmx:100806128 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3046 20 133901019 133903325 Amo20g3046 20 133901019 133903325 ECH