Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3013 ATGCTTAGGTTGTGGAAATGGTACCAAAATTGCTTGGCTGTTCACCCTGTTAAGACACAGGTAATCAGTTCAGGAATCATATGGGGTGTTGGTGACATTGCTGCACAAGCTGTCACTCATAGTTATTCTACACCTAACACTGCCCACACTCATCAAATTCAGGATGACGATGACGAAGAATTCAAGATCAACTGGAAGCGGGTGGCTACAACCAGCTTGTTTGGGTTAAGCTTTGTTGGCCCAGTTGGCCATTACTGGTATGAAGGCTTGGATAGATATATAAGATTGAGACTCATGCTCAAACCAGATTCCTTCCGCTTCGTTGCCTCTAAAGTTGCCATTGACGGGTTCCTTTTTGGGCCATTGGATTTACTCGCATTTTTCACTTACATGGGCCTTTCTACCGGAAAGAGTATTCCTCAAATCAAAGAAGATGTGAAGAGAGATTTTCTTCCCGCCTTTATCTTAGAAGGAGGGATATGGCCCATTGTTCAGGTCGCAAATTTTCGGTATGTACCCGTAAGGTATCAGCTCCTATATGTCAACCTCTTCTGCTTGCTGGATAGCTGTTTCTTGTCTTGGATTGAGCAACAACAGGATGCTCAATGGAAAAAATGGGTGAAATCTTTTCTACCTCTCAAGTAA 645 0.4326 MLRLWKWYQNCLAVHPVKTQVISSGIIWGVGDIAAQAVTHSYSTPNTAHTHQIQDDDDEEFKINWKRVATTSLFGLSFVGPVGHYWYEGLDRYIRLRLMLKPDSFRFVASKVAIDGFLFGPLDLLAFFTYMGLSTGKSIPQIKEDVKRDFLPAFILEGGIWPIVQVANFRYVPVRYQLLYVNLFCLLDSCFLSWIEQQQDAQWKKWVKSFLPLK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3013 214 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 1 213 - -
Amo20g3013 214 Pfam Mpv17 / PMP22 family 133 193 IPR007248 GO:0016021
Amo20g3013 214 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 213 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3013 Amo-Chr20 132775512 132778135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3013 8 193 Miscellaneous Gene Families AT4G04470 25.668 1.03e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3013 K13348 - gmx:100805283 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3013 20 132775512 132778135 Amo20g3013 20 132775512 132778135 ECH