Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3011 ATGAAGAACACGGAGCGGGTTGCGTTTTTGGCTTTAGCAGGGTTAACCTTAGCACCGCTTGCTGTGAAAGTAGATCCGAATTTGAATGTCATTTTGACTGCTTGCCTCACTGTGTTTGTGGGTTGTTACCGTTCTGTCAAACCGACTCCTCCAACTGAGACAATGTCCAATGAACATGCGATGCGATTTCCTTTTGTTGGGAGTGCAATGTTACTGTCCCTTTTCTTACTCTTCAAGTTTCTCTCCAAGGACTTGGTGAACGCTGTATTGACAGCCTACTTTATTGTGCTCGGGATTGTTGCATTATCGGCAACACTATTACCATCTATCAAACGGTATCTGCCAAAGAAGTGGAACGAGGATGTCATAGTCTGGCGCTTCCCATATTTTCGATCTTTGGAGATTGAGTTTACAAGATCACAGATTGTTGCTGCTATCCCTGGCACGTTCTTTTGTGTGTGGTATGCTTTGAGGAAGCATTGGCTGGCAAATAATATACTGGGTCTTGCTTTCTGTATTCAGGGAATTGAAATGTTATCTCTAGGATCTTTCAAAACTGGTGCTATTCTCTTGGCCGGTCTATTTGTATATGACATCTTCTGGGTTTTCTTCACTCCTGTTATGGTCAGCGTTGCAAAATCTTTTGATGCTCCAATAAAGCTTCTGTTCCCCACAGCAGATTCTGCAAGGCCGTTTTCAATGCTTGGGCTTGGTGATATTGTTATCCCTGGTATTTTTGTTGCATTGGCTTTGCGGTTTGATGTGTCTAGAGGAAAACAGCCCCAGTATTTCAAGAGTGCATTTTTAGGATACACCATTGGCTTGGTCCTTACAATCGTTGTGATGAATTGGTTTCAGGCTGCACAGCCTGCTCTTCTGTACATTGTTCCTTGTGTAATTGGATTTTTGGCCGCACATTGCTTATGGAATGGTGAAGTCAAACAGTTGTTGGATTTCAATGAGTCAAAGAGTGCTGATTCATCATCACAGGAGGGGACTGATGCCAAAGCTAGCAAGAAGGTAGAATAG 1029 0.4315 MKNTERVAFLALAGLTLAPLAVKVDPNLNVILTACLTVFVGCYRSVKPTPPTETMSNEHAMRFPFVGSAMLLSLFLLFKFLSKDLVNAVLTAYFIVLGIVALSATLLPSIKRYLPKKWNEDVIVWRFPYFRSLEIEFTRSQIVAAIPGTFFCVWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFLGYTIGLVLTIVVMNWFQAAQPALLYIVPCVIGFLAAHCLWNGEVKQLLDFNESKSADSSSQEGTDAKASKKVE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3011 342 MobiDBLite consensus disorder prediction 322 342 - -
Amo20g3011 342 Pfam Signal peptide peptidase 51 322 IPR007369 GO:0004190|GO:0016021
Amo20g3011 342 SMART psh_8 51 310 IPR006639 GO:0004190|GO:0016021
Amo20g3011 342 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 342 IPR007369 GO:0004190|GO:0016021
Amo20g3011 342 PANTHER SIGNAL PEPTIDE PEPTIDASE-RELATED 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3011 Amo-Chr20 132735270 132739932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3011 K09595 - gmx:100784956 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2440 10 85652551 85657216 Amo20g3011 20 132735270 132739932 hybridization