Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3006 ATGGTTTTCTACTTCAAGGCACGCCCTGAAGCTGGCGATTACACCATCTTCATGGGTCTCGACAAGTACGAGAACGAAGAACTCATCAAATATGGTTTCCCTGAAGATATCTGGTTCCATGTTGATAAGATGTCTTCAGCACATGTTTATGTAAGACTGCACAAAGGTCAGACTATTGATGACATTAGTGAAGGTTTACTGGAGGACTGTGCTCAGCTTGTTAAAGCAAATTCGATTCAAGGAAATAAGGTGAACAATATTGATGTTGTTTATACTCCCTGGGCCAATTTAAAGAAAACTGCTTCAATGGATGTTGGTCAAGTTGGTTTCCACAACCCCAAAATGGTCCGAACTGTGAGAGTGGAGAAGCGGATCAATGAGATTGTCAACAGGCTAAACAAAACAAAAGTGGAAAGGAAACCTGATTTGAGAGCTGAGCGTGAAGCAGTTAATGCAGCTGAAAGAGCTGAGAGAAAGCAACAAATGAGAGACAAGAAACGCCGTGAGGAATTGGAAAGACTTGAAAAGGAGAGACAAGCCGAACTGAGGAGCTACAAGGGTTTGATGGTTGCAGAGAATATGACATCCAATAAGAACATTGCATCAGGAAGCAAAACACTGCAAGAAATGGAGGATGATTTCATGTAA 648 0.4167 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVRVEKRINEIVNRLNKTKVERKPDLRAEREAVNAAERAERKQQMRDKKRREELERLEKERQAELRSYKGLMVAENMTSNKNIASGSKTLQEMEDDFM* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3006 215 Pfam NFACT protein RNA binding domain 1 112 IPR008532 -
Amo20g3006 215 PANTHER OS01G0750500 PROTEIN 1 215 - -
Amo20g3006 215 MobiDBLite consensus disorder prediction 140 177 - -
Amo20g3006 215 MobiDBLite consensus disorder prediction 196 215 - -
Amo20g3006 215 Coils Coil 149 179 - -
Amo20g3006 215 PANTHER DUF814-RELATED 1 215 IPR039730 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3006 Amo-Chr20 132526494 132529369 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3006 - - gmx:100802228 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3006 20 132526494 132529369 Amo20g3006 20 132526494 132529369 ECH
Amo10g2435 10 85518420 85521484 Amo20g3006 20 132526494 132529369 hybridization