Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2999 ATGGCAGCCATCGACTACGAAGACGCACGCGGCGGCTCCTACGACGACCGCCGCCAAACACCACCACAGCAGGACCTCGGCTACGACCCAAACTTCGTCCCCGACTCCGTCAAATCCTTCGTGGTCCACCTCTACCGTCACATCCGCGAGAAGAATGTCTACGAGATACACCAGATGTATGAGACCTCCTTCCACACTCTCTCCGACCGTCTCTTCAAGGACTCGCCCTGGCCCTCCGTCGATGCCGTCGCTCATTACGTCGACAACGACCACGTCTTCTGCCTCCTCTACCGTGAGATGTGGTTCCGCCACCTGTACGCTCGCTTAACCCCTACACTCCGCCAGAGGATCGATTCATGGGACAATTACTGCAGCTTGTTCCAGGTGGTGCTTCATGGTGTTGTCAACATGCAGCTTCCGAATCAGTGGCTATGGGATATGGTTGATGAGTTCGTTTACCAGTTCCAGAGCTTCTGCCAGTACCGCGCCAAGATGAAGAACAAGACGGAGCAGGAGATCGCTCTCTTGCGCCAGTTCGATCAGGCTTGGAATGTTTATGGGGTTCTTAACTTCTTGCAAGCGCTTGTGGAGAAGTCCATGATTATTCAGATACTTGAGCAGGAGAAGGAGGGGCTGGAGCAGTTCACTGCTACTGATGGTTATGACTACAATGGAGGAAGTAACGTGTTGAAGGTGTTGGGATATTTCAGCATGGTTGGGTTGCTGCGTGTGCACTGTCTTCTCGGTGATTATCATACGGGGCTCAAGTGCTTGCAACCTATTGACATTAGTCAACAGGGTGTTTACACAAGCGTGATTGGAAGCCACATCACAACCATATATCACTATGGTTTTGCTAATCTCATGCTCCGCAGATACGTGGAAGCAATTCGTGAATTTAACAAGATTCTCTTGTATATCTTTAAGACAAAGCAATACCATCAGAAGTCACCACAGTATGAGCAGATATTGAAGAAAAATGAACAAATGTATGCCTTGCTGGCTATTTGCCTTTCACTCTGCCCACAAAACAGGCTTGTTGATGAAACTGTGAACTCTCAATTGCGAGAGAAGTATGGTGAAAAGATGATTAGAATGCAAAGATATGATGATGAGGCATTTGCTATATATGACGAGCTCTTCTCCTATGCATGTCCCAAATTCATCACTCCTTCAGCACCTAGTTTTGAGGAGCCTCTTGTAAATTACAACCAGGATGCCTATAGGCTACAATTGAAACTGTTCCTTTATGAAGCCAAGCAACAACAGTTGCTATCCGGTGTCCGTACCTTCTTGAAGGTGTACTCAACAATCTCACTTGCAAAACTTGCAAGTTACATGGAAGTTGATGAACCCACCTTAAGGACTATCTTGATGACATACAAGCACAAGACACATTCAGTGGATAGTGATGGAAAAGTCATATCGAATGCTGATGTGGATTTCTACATAGATGATGACATGATTCGTGTTATGGAGTCTAAGCCTGCCAAGCGATATGGGGATTACTTTTTGCGGCAGATTGCCAAGCTTGAAGGGGTAATCAATGAGATGGACAGTGTAAAACTGGAGTGA 1575 0.4692 MAAIDYEDARGGSYDDRRQTPPQQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYETSFHTLSDRLFKDSPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQNRLVDETVNSQLREKYGEKMIRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEPTLRTILMTYKHKTHSVDSDGKVISNADVDFYIDDDMIRVMESKPAKRYGDYFLRQIAKLEGVINEMDSVKLE* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2999 524 Pfam RNA polymerase I-associated factor PAF67 115 510 IPR019382 GO:0003743|GO:0005737|GO:0005852
Amo20g2999 524 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 14 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
Amo20g2999 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 28 523 - -
Amo20g2999 524 MobiDBLite consensus disorder prediction 1 31 - -
Amo20g2999 524 ProSiteProfiles PCI domain profile. 299 498 IPR000717 -
Amo20g2999 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 28 523 IPR019382 GO:0003743|GO:0005737|GO:0005852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2999 K15029 - gmx:100786533 989.949