Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2996 ATGGTGAACTCGTTAGTTGAACGTGCCACGAGCGACATGCTGATTGGTCCTGATTGGGCTTTGAACCTTGAAATCTGTGACATACTCAACCATGATCCTGGGCAAGCAAAGGATGTCGTTAAAGGCATAAAGAGGCGGATTCGAAGTAAAAATCCTAAAGCTCAACTCCTTGCATTAACTTTGCTGGAAACAATTGTAAAGAACTGTGGAGATACTGTTCACATGCATGTTGCAGAGAAAGAGGTTCTTCATGAGATGGTGAAAGTAGCAAGGAAAAAGCCTGATTCTAATGTCAGAGAGAAGATACTGAATCTTATTGATACTTGGCAAGAAGCCTTTGGAGGCCAAAGAGCAAGATATCCTCAATATTATGCTGCATACCAAGAACTGTTGCATGCAGGAGCAGTATTCCCTCCAAGATCTGAAAGTTCTCCACCTGTATTCACACCTCTACAAACACGTCCATTGACATCACATCCACAAAATATCCGCAACTTTGATGTGCAGGGGGACACAGCTGGGTCATCATCAACCGGGTCATCAACCGAGGCTGAGTTTCCAACCCTAAGTTTGTCTGAGATTCAAAACGCACGTGGTATCTTGGATGTTCTTGCAGAGATGCTGAATGCAATAGACCCTGGAAATAAAGAAGGGCTTAGACAGGAGGTTATAATTGAATTGGTGGGCCAGTGCAGAACTTACAAACAGAGAGTGGTACATCTTGTTAACTCAACTTCTGATGAGTCACTCCTATGCCAAGGTCTAGCTCTTAATGATGATCTACAACGTGTACTGGCCAAGCATGAATCCATTGCTTCAGGAACTTCTAATCAAAAGGACAACGAGAAACCAAAGCCTTCAACTCCTGGAGCACTTGTTGATCATCCTCTGGTTGATACTGAAGATGGTGGTAAACAAAGCGATGAGAGATTACCATCTAATGCTGAAGCTGAGTCCCAGCCATTCAACCAATTACTACTTACTGCACCCCCAACAGCAAATGGTTCTGCTGCCCCTTTGAATGTTAATGCCAAATGGGACCTACTCAGTGGTGATGACTATAACTCATCACCTAAAGCTGATAACTCACTTGCTCTTGTTCCTCTAGGAGAACAGCAGCCAGCCAGTCCAACGCCTCATCAGAATAATGCACTTGTTCTTTTTGATATGTTCTCTAATGGTAACAATGGACCTGCTCCAATTCTTGGCCAACCAAATTCATTATCCCCCCAATTTCATCACCAGACATTCATATCTCAAGGCATATTTTATCCCAATGTAAATATGCCAAATGTGGGATCACCTCGTTATGAGCAACAATCATCACCATTTGCACAAACCACAGCTCCTATTTGGAATAATTCTCAGGCCCAACAAAACATCAACAACAACAACAACCACCACCAAATTCACCAGCTTATGGTACACCTAATGATTCTTTATTTGGTTAAATTCTTTCACAACAACTACTCTTTTTCCTTAAGCAATTGCACACAAAGTGGTGGATCATTTCCACCACCTCCTTGGGAAACAACCGAAAATGGTAGTCCTACAGCAGCCGGCAACCAATATCCACAACCATTACAGGTCACTCAAGTGGTTATGACACATGTACAGAGTGCTGGTACGCATGGTCAAGGACTACCTCAGCCAATGGGGAATGATCAAGCTATCAGTATGTATATGCAGCAGCCAAATGCAAATACCTATATTTCAACAATCAATAACAATAATGCTGGTCAAAGCAATCAGCAATTCCCTCAGCAGATTCAAGGTGTTCCTGGTGGTGCTTACATGTCTACGGTTCCACATCAAATGCAAAATGGTAACATGGCTTACATGTATCCACAACAAATGTATGGCAACCAATTCGTCGGATATGGTTACGGTCAGCAGCAACAAGGGGTTCAATATGTTGAGCAACAGATGTATGGTTTATCTGTGAGTGATGACAATGGTATGAGGAACTCTTACCAAGTTTCTGCTACTTCTTATGTGCCATCTGGAAAACCTTCAAAGCCAGAGGATAAGTTGTTTGGGGACCTTGTTGATATGGCTAAAGTGAAATCCCCTAAAACAACTGCTCCTGACCGAGCTAGTAACACCTAG 2109 0.4272 MVNSLVERATSDMLIGPDWALNLEICDILNHDPGQAKDVVKGIKRRIRSKNPKAQLLALTLLETIVKNCGDTVHMHVAEKEVLHEMVKVARKKPDSNVREKILNLIDTWQEAFGGQRARYPQYYAAYQELLHAGAVFPPRSESSPPVFTPLQTRPLTSHPQNIRNFDVQGDTAGSSSTGSSTEAEFPTLSLSEIQNARGILDVLAEMLNAIDPGNKEGLRQEVIIELVGQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESIASGTSNQKDNEKPKPSTPGALVDHPLVDTEDGGKQSDERLPSNAEAESQPFNQLLLTAPPTANGSAAPLNVNAKWDLLSGDDYNSSPKADNSLALVPLGEQQPASPTPHQNNALVLFDMFSNGNNGPAPILGQPNSLSPQFHHQTFISQGIFYPNVNMPNVGSPRYEQQSSPFAQTTAPIWNNSQAQQNINNNNNHHQIHQLMVHLMILYLVKFFHNNYSFSLSNCTQSGGSFPPPPWETTENGSPTAAGNQYPQPLQVTQVVMTHVQSAGTHGQGLPQPMGNDQAISMYMQQPNANTYISTINNNNAGQSNQQFPQQIQGVPGGAYMSTVPHQMQNGNMAYMYPQQMYGNQFVGYGYGQQQQGVQYVEQQMYGLSVSDDNGMRNSYQVSATSYVPSGKPSKPEDKLFGDLVDMAKVKSPKTTAPDRASNT* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2996 702 MobiDBLite consensus disorder prediction 298 312 - -
Amo20g2996 702 Pfam CID domain 28 111 IPR006569 -
Amo20g2996 702 CDD GAT_GGA_like_plant 193 271 - -
Amo20g2996 702 Pfam GAT domain 201 273 IPR004152 GO:0035091|GO:0043130
Amo20g2996 702 MobiDBLite consensus disorder prediction 270 284 - -
Amo20g2996 702 MobiDBLite consensus disorder prediction 270 318 - -
Amo20g2996 702 Gene3D - 1 147 IPR008942 -
Amo20g2996 702 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Amo20g2996 702 SUPERFAMILY GAT-like domain 145 274 - -
Amo20g2996 702 ProSiteProfiles GAT domain profile. 185 273 IPR004152 GO:0035091|GO:0043130
Amo20g2996 702 MobiDBLite consensus disorder prediction 501 520 - -
Amo20g2996 702 CDD VHS 2 130 - -
Amo20g2996 702 Gene3D - 188 280 IPR038425 -
Amo20g2996 702 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Amo20g2996 702 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Amo20g2996 702 PANTHER TARGET OF MYB PROTEIN 1 1 691 - -
Amo20g2996 702 MobiDBLite consensus disorder prediction 153 186 - -
Amo20g2996 702 Pfam VHS domain 3 130 IPR002014 GO:0035091|GO:0043130
Amo20g2996 702 PANTHER TOM1-LIKE PROTEIN 1 691 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2996 Amo-Chr20 132288268 132297117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2996 - - gmx:100805762 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2996 20 132288268 132297117 Amo20g2996 20 132288268 132297117 ECH