Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2934 ATGGCGATTAGGGTTTTTCTCATTGTTCTTCTCTTCCTTTCTTTCACCAATCTGACTTATTCGCTCTACGAAGATCAAGTTGGCCTCATGGATTGGCACCAAAAATACATTGGGAAAGTAAAGCATGCTGTGTTCCACACTCAGAAGACTGGGCGAAAGCGTGTTTTGGTGTCTACTGAAGAGAATGTTGTAGCTTCGCTCGACCTTCGTCATGGAGAGATTTTTTGGAGGCACGTTCTTGGGACAAATGATGTTATTGATGGACTTGACATTGCCCTGGGAAAATATGTCATTACTCTTTCTTCGGATGGCAGTATATTGAGAGCATGGAACCTTCCTGATGGACAGATGGTTTGGGAGTCTTCCCTTCCGGGCTCGAAGGCATCAAAGTCAATATTACACATCCCAAAAAATCTGAAAGCTGACAAGGATGATTTGATCCTTGTTTATGGTAAAGGGAGCCTCAATGCCGTTTCAGGTGTAGATGGTGAAGTTCTCTGGAAGAAAGATTTTGCTGGTGAAAGCATTGAGGTTAGCCATATTATTCAATCTTCTGATGTGATCTATGTGACTGGTTTTGCTGATTCGTCAAAGATTAGTGTGTATGGATTAAATGCTAAGAATGGAGAGTTGTTAGAGAACAACCATGCAGCACTTCCTTTTGGTACTTTTGGGGAATTATTAGCAGTCTCGGGTGATATGTTTGTAGTATTGGATGAAATGAGATCAAAGATAGTAATAGTACACCTGAAGAATGGAGAGATTAGCTACAACCAGAAGCATATTTCAGACCTCACCAAAGATTTAGCTGGTCAGCCAGTAATACTACCATCAAGGCTTCCAGGAATGTTTGCATTAAATACCAATTCCTATGTTCTTTTAATTAAAGTGACAAATCAAGGTGAGCTGGTGCTGGTGGACAAAGTTAATAATGGAGCAGCTGTTAGTGATTCTTTGTCAATTTCAGAGGATGAACATGCTTTTGCATTTGTTCATTATGGAGACAATAAAATCCACCTCTCTGTAAAGAATGTTAATGATTGGAATCATGATTTGCTTAAGGAGAGCATAGTAATAGATCATCAAAGAGGGAAAATTGATAAGATTTTTGTGAACAATTATGTAAGGACAGATAGATCCCATGGGTTTAGAGCATTGATGGTAATGGAGGACCATTCGCTCTTATTAGTACAACAAGGAGAAATTGTTTGGAGTAGAGAGGACGGTCTTGCATCAGTTGTAGATGTAACAACATCAGAACTACCTGTGCAAAAGGAAGGTGTGTCTGTGGCAAAAGTTGAACAGAACCTTTTTGAATGGCTTAAGGGACATATGTTGAAGCTCAAAGGAACTCTAATGATTGCCAGTCCTGATGATTTGGCAGCTATTCAGGCACTGAGGTTGAGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCATAATGGTTTCCGGAAGTTGCTTATAGTACTTACAAGGGCGGGCAAAGTGTTTGCTTTGCACACTGGAGATGGACGTGTAGTTTGGTCTATTCTACTTCCTAGTTTACGCAAGTCAGAAGCATGTGAAAATCCAGTTGGTCTTCACATCTATCAGTGGCAAGTTCCACATCATCATGCATTGGATGAGAATCCATCTGTCCTCGTTGTTGGGCAATGTGGACCAAGTTTGTCCACCCCAGCTGTTCTTTCTTTTATTGATGCTTACACAGGGATGGAACTCAAGTCTTTGAGTCCAGCTCATACTGCTGCTCAAGTCATTCCACTTCCTTATACTGATTCAACTGAACAGCGTCTGCATCTAATTATAGATGATAAGCAGCATGCATATTTGTACCCAAGAACTCCTGAAGCTATTGATATTCTGAAGCACGAATTTTCAAATGTGTACTGGTACTCAGTTGATGCTGATAATGGTGTTATAAGAGGTCATGCCCTGAAGAGTAACTGTATTCAGGAAGCAGTGGATGAATATTGCTTTGACTTCAGGGACTTATGGTCAGTTGTATTCCCATCTGAATCAGAAAAGATTATTGCAACTATGACAAGAAAATCAAATGAGGTTGTTCATACTCAAGCAAAAGTTATGACTGACTATGATGTCATGTATAAGTATATATCAAAGAATCTACTTTTTGTCGCGAATGCAGCACCAAAGGCCGCAGGGGAAATTGGTACAGTAATCCCAGAGGAGGCATGGCTGGTCATCTATATCCTTGATACCGTAACCGGTCGTATACTGCATCGCATGACTCATCATGGATGCCAGGGTCCTGTTCATGCTGTATTCAGTGAAAACTGGGTTGTCTACCACTATTTTAATCTTAGAGCACACAGATATGAGATGTCAGTTGTTGAGATCTATGATCAGTCTCGAGCGGATAACAAAGATGTTTGGAGGTTTGTTCTTGGGAAGCATAATCTTACATCACCTGTATCTTCTTATTCTCGACCAGAAGTAATAGCAAAATCACAATCATACTTTTTTACCCATTCTGTGAAAGCAATTGAAGTGACTTCAACTGCCAAGGGTATAACCTCTAAGCAGCTTCTTATTGGAACAATTGGTGATCAGGTTTTGGCCCTTGATAAACGCTTTTTGGATCCCCGGCGCACAGTTAATCCTTCACAAGCTGAAAAAGAAGATGGAATTATTCCTCTCACTGATTCATTGCCAATCATTTCCCAGTCCTACATTACACATGCGCTTAAAGTGGAAGGTCTCCGAGGCATAGTAACAGTACCGGCCAAGCTGGAGTCTACATCACTCGTCTTTGCATATGGAGTAGATCTATTTTTCACCCAGATTGCTCCTTCAAGGACTTATGATTCACTGACCGAAGATTTCAGCTATGCTCTACTGCTTCTAACAATTGTCGCTCTAGTAGCTGCGATATTTGTTACGTGGGTACTGTCTGAGAGGAAAGATCTGCAAGATAAATGGAGATGA 2946 0.4073 MAIRVFLIVLLFLSFTNLTYSLYEDQVGLMDWHQKYIGKVKHAVFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRHVLGTNDVIDGLDIALGKYVITLSSDGSILRAWNLPDGQMVWESSLPGSKASKSILHIPKNLKADKDDLILVYGKGSLNAVSGVDGEVLWKKDFAGESIEVSHIIQSSDVIYVTGFADSSKISVYGLNAKNGELLENNHAALPFGTFGELLAVSGDMFVVLDEMRSKIVIVHLKNGEISYNQKHISDLTKDLAGQPVILPSRLPGMFALNTNSYVLLIKVTNQGELVLVDKVNNGAAVSDSLSISEDEHAFAFVHYGDNKIHLSVKNVNDWNHDLLKESIVIDHQRGKIDKIFVNNYVRTDRSHGFRALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVQKEGVSVAKVEQNLFEWLKGHMLKLKGTLMIASPDDLAAIQALRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRVVWSILLPSLRKSEACENPVGLHIYQWQVPHHHALDENPSVLVVGQCGPSLSTPAVLSFIDAYTGMELKSLSPAHTAAQVIPLPYTDSTEQRLHLIIDDKQHAYLYPRTPEAIDILKHEFSNVYWYSVDADNGVIRGHALKSNCIQEAVDEYCFDFRDLWSVVFPSESEKIIATMTRKSNEVVHTQAKVMTDYDVMYKYISKNLLFVANAAPKAAGEIGTVIPEEAWLVIYILDTVTGRILHRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRYEMSVVEIYDQSRADNKDVWRFVLGKHNLTSPVSSYSRPEVIAKSQSYFFTHSVKAIEVTSTAKGITSKQLLIGTIGDQVLALDKRFLDPRRTVNPSQAEKEDGIIPLTDSLPIISQSYITHALKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWVLSERKDLQDKWR* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2934 981 Pfam ER membrane protein complex subunit 1, C-terminal 763 980 IPR011678 -
Amo20g2934 981 Pfam PQQ-like domain 104 299 IPR002372 -
Amo20g2934 981 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 53 584 IPR011047 -
Amo20g2934 981 Gene3D - 28 339 IPR015943 GO:0005515
Amo20g2934 981 PANTHER UNCHARACTERIZED 7 981 IPR026895 GO:0072546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2934 Amo-Chr20 131393261 131399697 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2934 K23562 - gmx:100790095 1705.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2934 20 131393261 131399697 Amo20g2934 20 131393261 131399697 ECH