Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2924 ATGGCATCCACCTTCTTCAACAACCTTCTCGCAACACCCAAAGGCCAAAGCACGTCCTATCCTATGCACTGCAACAACCCATGCAACCTGCCACCTACTCCCCAACTCCTCCCAACCGCCAACTTCGGACCCCTCACAGCGGGTCAGTCAGTACTCACTACTCCACATTCCCTCTTTTATCATTTTAATTCAGTTATTTACTGCGGCAATTTTCTTTGTTTTTACTTTACATGTACCATTTCGATAGGACTGCTCACAAGTTCTTTGAGGGATGTACTTCAAGGTCTCCATTCCCGAACGGCGCCAGAGCTTCTATTTTATTTACTCTGTCGAGAGCCCTTCGAGGTGACACAGTACGGACCTAGGTTCACCGGCGTCAGCGCGCAGATTCTTGGTGCTGATGACAAGTACATTTGCCAGTTCTCAGAGGAATCGCAAAACTTCTGGGGAGATGGTCATGAACTGATTCTGGGAAACACCTCTGTGGCCAAGAATGATTTGAGACCTCCAAACAAGGAGCTTCCCCCTCAGGTTTTCAAGTTACCCCGCTTTGGCATCAAGGTTTCATTTGTGATGATGGAAGTGGAGACAGCTCGTTGGGAATATAGTACGCGTTCTGTTTATGGTTGGGGCGATGTTGGGTCTGCACAGAAGTCTACAGCTGGCTGGCTTGCAGCTTTTCCTGTTTTTGAACCTCACTGA 702 0.4829 MASTFFNNLLATPKGQSTSYPMHCNNPCNLPPTPQLLPTANFGPLTAGQSVLTTPHSLFYHFNSVIYCGNFLCFYFTCTISIGLLTSSLRDVLQGLHSRTAPELLFYLLCREPFEVTQYGPRFTGVSAQILGADDKYICQFSEESQNFWGDGHELILGNTSVAKNDLRPPNKELPPQVFKLPRFGIKVSFVMMEVETARWEYSTRSVYGWGDVGSAQKSTAGWLAAFPVFEPH* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2924 233 Pfam Tocopherol cyclase 118 233 IPR025893 GO:0009976
Amo20g2924 233 PANTHER - 112 233 IPR025893 GO:0009976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2924 Amo-Chr20 131011320 131012589 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2924 K09834 - aip:107624241 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2924 20 131011320 131012589 Amo20g2924 20 131011320 131012589 ECH
Amo10g2429 10 85422051 85426284 Amo20g2924 20 131011320 131012589 hybridization