Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2896 ATGGGTCAAGCATTTTTCTCCATATTTCAGCTTGAAACAAAGAGGTTGCTATGGCTTATTGGCATTACATTTGCAGTGTTTTTACTCTTCCAGTATTCTGAGCTTCCATATTTAGCAGCAACAACAACATCATCAGGAAGCAGTAGATTCCATCCAGCAGATCCTCCATCTGAGTCTATACTTAACAATGTTACTACGGATTTCGATATAGCAAACTCTACTAATGGACATGTTCTTGAGAGGATAGTTAATTCAACTAGTTCATCAATTGAAAAGGACAATGTTTTGGGAGCAGGTTTTGTTTTAGAACCAAAAAAGGTGTCCATATCAAACACTTCATCTCTTGTAGGATTTGATGAGTCCGATGAAAATCCCGTGGTCGAAAATGTAAGGATATCAGATAATGGATCTGCAATAGAGCAGGCAGAGAATCTTGAACTGAAGAGTTCTAACAATGGTATGGATATGAATTTTACAAGAGAGGTCAACACTTCATCTGAATTAGAGCATAAATCAGATACATATTTAAGTCCTCCCGTCGAAATGAAGCCAAATATTACACCTCCTCAAGGGTTATTGAACATTTCCAATGAAATCGATTCGGAGAATGATGAGAGGCCAAAAGATGAAGTCAATGTGCTTGGCAAGAACTCTTCTATCAGTAGTATGCCTAAGGAGAATAAAGATTCTCGTATAGCTGTTCCGAAAGTAACATCAATCTCTGAAATGAATGAATTATTGCTTAAAAGCCGTGTCTCATATCGTTCTATGAGGCCAAGGTGGTCTTCATCAGTTGATAATGAGCTACTGAAGGTTAGATCGGAGATTGAAAATGCACCAATTGTAGAGAATGTTGATAATCTTTACGCCCCCCTTTATCGAAATCTTTCCATGTTCAAAAGGAGCTATGAATTAATGGAAGAGACTCTCAAAGTTTATGTATATAGAGAAGGGTCCAAACCAATAATGCATTTGCCATATCTTTTGGGAATTTATGCTTCCGAGGGATGGTTCATGAGGCAGATGGAAGGTAATAAAAGATTTGTTACCAAGGACCCAAAGAAGGCACACCTGTTCTACTTACCTTTCAGTTCCCGGATGCTAGAGGAAACCTTGTATGTACCGGATTCGCATAATAATAGGAACCTGAGGAAGTATCTGAATGGTTATGTCGACTTGATCGCAGCGAAACATCCTTTCTGGAACAGAACCGGTGGTGCTGATCATTTCCTTGTTGCTTGCCATGATTGGGCCCCAACAGAAACAAGACAGAACATGGCCAAGTGCATAAGAGCCCTATGCAATTCTGATGTCAAAGAAGGCTTTGTGATAGGTAAAGATGTGTCTCTTCCTGAAACCTATGTCAGAAATGCGCAGAAACCCACAAGAGACATTGGTGGAAGACCAGTTTCAAAAAGGAAAACATTGGCATTCTTTGCTGGTGGCATGCATGGTTATGTTAGGCCAATCCTATTGCAGCATTGGGAGAACAAAGACCCTGACATGAAAATCTTTGGTATATTGCCAAAATCTAAGGGTAACAGAAACTACATTCAGTACATGAAGAGCAGCAAGTACTGCATTTGTGCAAAAGGGTATGAAGTTAATAGTCCAAGAGTTGTTGAGGCCATATTCTATGAATGTGTTCCTGTTATCATATCTGATAACTTTGTGCCTCCATTCTTTGAAGTGTTGAATTGGGAATCATTTGCTGTTATTGTTCTGGAGAAGGATATTCCAAATTTGAAGAGTATTCTACTTTCAATCCCACAAAAGAGGTATCTTCAGATGCAGATGAGGGTAAAAAAAGTGCAGCAGCATTTCCTTTGGCATAGGAGCCCTGAGAAGTATGATATGTTTCACATGATACTTCATTCTATTTGGTTCAATAGAGTCTTCACCACAAGAGCTAGATAA 1917 0.3907 MGQAFFSIFQLETKRLLWLIGITFAVFLLFQYSELPYLAATTTSSGSSRFHPADPPSESILNNVTTDFDIANSTNGHVLERIVNSTSSSIEKDNVLGAGFVLEPKKVSISNTSSLVGFDESDENPVVENVRISDNGSAIEQAENLELKSSNNGMDMNFTREVNTSSELEHKSDTYLSPPVEMKPNITPPQGLLNISNEIDSENDERPKDEVNVLGKNSSISSMPKENKDSRIAVPKVTSISEMNELLLKSRVSYRSMRPRWSSSVDNELLKVRSEIENAPIVENVDNLYAPLYRNLSMFKRSYELMEETLKVYVYREGSKPIMHLPYLLGIYASEGWFMRQMEGNKRFVTKDPKKAHLFYLPFSSRMLEETLYVPDSHNNRNLRKYLNGYVDLIAAKHPFWNRTGGADHFLVACHDWAPTETRQNMAKCIRALCNSDVKEGFVIGKDVSLPETYVRNAQKPTRDIGGRPVSKRKTLAFFAGGMHGYVRPILLQHWENKDPDMKIFGILPKSKGNRNYIQYMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLNWESFAVIVLEKDIPNLKSILLSIPQKRYLQMQMRVKKVQQHFLWHRSPEKYDMFHMILHSIWFNRVFTTRAR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2896 638 MobiDBLite consensus disorder prediction 175 195 - -
Amo20g2896 638 PANTHER EXOSTOSIN FAMILY PROTEIN 187 634 - -
Amo20g2896 638 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 187 634 IPR004263 GO:0006486|GO:0016757
Amo20g2896 638 Pfam Exostosin family 307 587 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2896 Amo-Chr20 130172171 130175732 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2896 - - gmx:100818271 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2399 10 83826981 83829935 Amo20g2896 20 130172171 130175732 hybridization