Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2861 ATGGCTCACCTCTTCAGGGACCTCTCATTAGGACATTCCAAGAGAGAGACCACTCCGCCGCCACGGCCGCCCTCAATTACGCCTCCCAGGCAATCTCACGCTGAAGACCTTCCGTCACCGCTCGGTCAGCTCGCCGCCAAGCTCACCGATTCCGACCTCAACCTAACGGCCTACGAGATCTTCGTCGCCGCCTGCCGCACCTCCTCCGGGAAGCCTCTGAGCTCCGCTGCCAATGGCTCCAACTCCAACAGCAGCAGCAACAACAACAACCACTACTCGTCGTCCTCCACTGAGTCGCCGAGTCACAACTCGCCGAACACGCCGGCGGTGCAGCGATCCCTCACTTCCACAGCCGCCAGCAAGGTGAAGAAGGCGTTCGGTTTGAAATCGCCGGGTTCGGGGTCCAGGAAGAGTCCTGGCTCAGGTCCGGGTTCGGGTTCGGGTTCGGGTCAGGGGAAGCCAAAGAGGCCGTTAACGGTCGGGGAGCTCATGAGGAACCAGATGAGGGTTTCGGAAGCCATGGATTCGCGCGTGAGGCGTGCGCTTCTCAGGATCTCCGCTGGCCAGGTTGGAAGGAGGATTGAGTCTGTGGTGGTTCCGCTTGAGCTTTTGCAGCAGCTCAAGTCTTCGGATTTTACTGATCAGCAGGAGTATGAAGAATGGCAGAAGAGGACACTGAAGGTTCTGGAGGCCGGTCTGATTTTGCATCCACACATGCCAGTCGATAAGTCCAATTCTGCCGCACAGCGTCTACGGCAGATCGTTCATTCGGCTTTGGATAGGCCGATAGAAACTGGGAGGAACAATGAGTCTATGCAGGTTCTTCGTAGTGCTGTCATGTCGCTTGCAAGTAGGTCATATGATGGGTCTGATTCATGCCACTGGGCTGATGGGATTCCTCTGAATCTTAGGCTTTATGAAATGCTGCTGCAGTCATGCTTTGATGCTAACGATGATTCATCAGTTATTGAGGAGTTTGATGAACTAATGGAACAGATTAAGAAGACCTGGGGAATCCTTGGACTGAACCAGACACTCCATAATCTCTGTTTTACTTGGGTTTTGTTTCACCGATTTGTTGTGACCGGACAGGTAGATTTGGACCTGCTTTCTGCAGCTGATGGCCAGCTAGCTGAAGTAGCAAAGGATGCAAAAACAACAAAGGATGCAGAATATTCCAAAGTTTTGAGTTCTACGTTGACTTCAATATTAGGATGGGCTGAGAAAAGGCTGCTTGCATATCATGAAACTTTTGACCGTGGAAATGTTGAGACCATGCAGGGAATTGTTTCTTTAGGAGTTGCAGCAGCTAAAATTTTAGTTGAAGACATTTCTACTGAGTATCGGCGAAGAAGAAGAACTGAAGTCAATGTGGCCCGTGAAAGGATTGATACTTACATCAGGTCATCACTACGTACTGCTTTTGCTCAGATAATGGAGAAAGCAGACTCAAGCAGGAGAGCATCAAAAAATCAGCCAAATGCTCTCCCACTCCTTGCCATCCTTGCAAAGGATGTAGGTAGCTTGGCAGTTACTGAAAAGCAAGTGTTTAGTCCAATACTTAAGAGATGGCATCCTTTGGCAGCAGGTCTTGCTGTTGCCACCCTTCATCAATGCTATGGGAATGAATTGAAGCAATTCATATCGGGCATCACAGAACTGACACCAGATGCTGTTCAAGTGTTGAGAACCGCCGATCAGTTGGAGAAAGACCTTGTGCAGATAGCAGTTGAAGATTCAGTGGAGAGTGATGATGGTGGTAAAGCAATAATCCGTGAGATGCCTCCTTATGAGGCTGAAGCTGCAATTGCAAATCTGGTGAAAATATGGATTAAGACTAGATTAGACAGACTGAAGGAGTGGGTTGATAGAAATCTTCAGCAAGAGCATTGGATTGCACAAACAAATCAAGAAGGATATGCTCCATCTGCTGTTGAAGTTTTGCGGATCATGAATGAAACTTTGGATGCATACTTTCAGCTCCCAATACCGATGCATCCTGCTTTGCTTCCTGAAGTGATGGCTGGCCTTGACAGATGCCTTCAGTACTATGTTACCAAAGCAAAATCTGGATGCGGATCACGAAATTCATTTGTTCCAACAATGCCAGCATTGACCAGATGCACCATGGAGTCAAAGTTTCAAGGCTTTGGGAAGAAAAAGGAAAAATCTCCCAATTCCCAGAAGCGAAATCCTCAGGTAGCAACAAATGGGGATAGCTCTTCTGGGATACCACAACTCTGTGTGCGTATAAATACTTTGCAATGGATCCTGGGTGAATTTGATGTCCTGGAAAAAAGAATAATTACACTTTTACGGAACTCTGAATCTGCTCAAGTAGAGGATTTTTCAAATGGATTAGCGAAAAAGTTTGAATTGTCTCCAGCAGCTTGTTTAGAAGGAATTCAACAACTATGTGAGGCAGTGGCATATAGAATTGTCTTTCATGATCTTAGACAGGTTTTATGGGATGGTTTATATATTGGGGATCCATCATCTTCCAGGATTGAGCCATTTCTCCAGGAACTTGAGCGGAAGCTGATGTTTGTTTCAGACACTGTTCATGAAAGAATCCGCACCCGTCTTATCACTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGTGGTCCATCCCGTGCTTTTTCCCGGAAGGACTCTCAGATCATCGAGGATGATTTCAAATTTCTTAAGGAACTATTTTGGGCAAATGGGGATGGCTTGCCTTCTGAATTAATAGACAAGTTTTCAACTACTGTGAGATCTATCCTTCCCCTTTTCAGAACTGACACAGAGACCATTATAGAGCGGTTTAGACGAGTAACCCTGGAGACATATAAATCCTCTGCAAGGTCTAGGCTTCCATTACCTCCAACTTCTGGCCAGTGGGATCCATCTGAACCAAACACGTTATTACGTGTTCTATGCTATAGAAACGATGAAATAGCCTCTAAGTTTCTTAAAAAGACATATGATCTACCTAAGAAACTCTAA 3009 0.4653 MAHLFRDLSLGHSKRETTPPPRPPSITPPRQSHAEDLPSPLGQLAAKLTDSDLNLTAYEIFVAACRTSSGKPLSSAANGSNSNSSSNNNNHYSSSSTESPSHNSPNTPAVQRSLTSTAASKVKKAFGLKSPGSGSRKSPGSGPGSGSGSGQGKPKRPLTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELLQQLKSSDFTDQQEYEEWQKRTLKVLEAGLILHPHMPVDKSNSAAQRLRQIVHSALDRPIETGRNNESMQVLRSAVMSLASRSYDGSDSCHWADGIPLNLRLYEMLLQSCFDANDDSSVIEEFDELMEQIKKTWGILGLNQTLHNLCFTWVLFHRFVVTGQVDLDLLSAADGQLAEVAKDAKTTKDAEYSKVLSSTLTSILGWAEKRLLAYHETFDRGNVETMQGIVSLGVAAAKILVEDISTEYRRRRRTEVNVARERIDTYIRSSLRTAFAQIMEKADSSRRASKNQPNALPLLAILAKDVGSLAVTEKQVFSPILKRWHPLAAGLAVATLHQCYGNELKQFISGITELTPDAVQVLRTADQLEKDLVQIAVEDSVESDDGGKAIIREMPPYEAEAAIANLVKIWIKTRLDRLKEWVDRNLQQEHWIAQTNQEGYAPSAVEVLRIMNETLDAYFQLPIPMHPALLPEVMAGLDRCLQYYVTKAKSGCGSRNSFVPTMPALTRCTMESKFQGFGKKKEKSPNSQKRNPQVATNGDSSSGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAQVEDFSNGLAKKFELSPAACLEGIQQLCEAVAYRIVFHDLRQVLWDGLYIGDPSSSRIEPFLQELERKLMFVSDTVHERIRTRLITEIMRASFDGFLLVLLAGGPSRAFSRKDSQIIEDDFKFLKELFWANGDGLPSELIDKFSTTVRSILPLFRTDTETIIERFRRVTLETYKSSARSRLPLPPTSGQWDPSEPNTLLRVLCYRNDEIASKFLKKTYDLPKKL* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2861 1002 MobiDBLite consensus disorder prediction 716 741 - -
Amo20g2861 1002 PANTHER ELONGATION FACTOR TS (DUF810) 2 1002 - -
Amo20g2861 1002 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 833 943 IPR014772 -
Amo20g2861 1002 MobiDBLite consensus disorder prediction 69 158 - -
Amo20g2861 1002 MobiDBLite consensus disorder prediction 1 42 - -
Amo20g2861 1002 MobiDBLite consensus disorder prediction 69 120 - -
Amo20g2861 1002 MobiDBLite consensus disorder prediction 134 148 - -
Amo20g2861 1002 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 559 702 IPR014770 -
Amo20g2861 1002 PANTHER PROTEIN UNC-13 HOMOLOG 2 1002 IPR008528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2861 Amo-Chr20 129366723 129372574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2861 - - gmx:100814675 1718.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2861 20 129366723 129372574 Amo20g2861 20 129366723 129372574 ECH
Amo10g2385 10 83036147 83041731 Amo20g2861 20 129366723 129372574 hybridization