Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2806 ATGGTTTCTCTCGAGTTGAAAGGATGTGGAGTACTGTCTGAAGCATTCATCAATTGTCCGCTCTTAACTTCTCTGGATGCTTCCTTTTGCAGCCAACTAACAGATGAATGCTTATCTGCTACCACTGCCTCATGCCCGTTAATTGAATCGTTAATATTAATGTCATGCCTATTGATTGGTTCGAAAGTACTTCATTCTCTGTGTTCACTTCCAAATTTGACGGTTCTTGACTTATCATACACTTTCTTGGTGGACTTGCAGCCTGTTTTTGAGTTTTGTTCACAACTAGAGGTGCTAAAGTTGCAAGCATGCAAATCTCTTTCCGACACTTCACTGGAACCTCTTTACAAAGGAGGTGCTTTACCTGCACTACAGGAGTTGGACTTGTCCCATGGAACACTCTGTCAGTCTGCCATAGATGAACTTCTTGTTTGCTGCACAAATCTCAGGCGTGTGAGCCTGAATGGCTGTGAGAATGTGCATGATTTGAAGTGGGGATGCAGTCATGGGCAGGTTGATGTGTCGCCTGCTCTGAAGATCCCATATGGTGTAAGTTCCCATGAGAATGTGTTGGAGTCAAGTCAGGAATCCACCTGCTTACTTCAGAACCTCAACTGTGTGGGATGTACAAATATTATAAAGGTTGAGATTCCATCAAGGGCACATTGTTTAAATCTATTATTCTTAAACCTTTCGCTATCAAGGAATTTGAAGGAGGTCAATATTACTTGTCTCAACCTATGCTTTCTTAATTTAAGCAACTGTTCTTCGTTGGAAATTCTAAGGCTAGATTGTCCAAGATTGACCAGCCTATTTCTTCAGTCTTGCAGTATTGATGGGGAAGCTGTTGAAGCTGCCATATCAAAATGCAATATGCTGGAGACTCTTGATGTTCGCTTTTGTCAGAAGATAAGTTCAACAAGTGTTGCGAGATTCCGTACATCATGTTCTAGTTTGAAGCGGATATTCAGCAACTTGTCAAATTAA 987 0.4134 MVSLELKGCGVLSEAFINCPLLTSLDASFCSQLTDECLSATTASCPLIESLILMSCLLIGSKVLHSLCSLPNLTVLDLSYTFLVDLQPVFEFCSQLEVLKLQACKSLSDTSLEPLYKGGALPALQELDLSHGTLCQSAIDELLVCCTNLRRVSLNGCENVHDLKWGCSHGQVDVSPALKIPYGVSSHENVLESSQESTCLLQNLNCVGCTNIIKVEIPSRAHCLNLLFLNLSLSRNLKEVNITCLNLCFLNLSNCSSLEILRLDCPRLTSLFLQSCSIDGEAVEAAISKCNMLETLDVRFCQKISSTSVARFRTSCSSLKRIFSNLSN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2806 328 PANTHER OS10G0396666 PROTEIN 1 290 - -
Amo20g2806 328 SUPERFAMILY RNI-like 7 323 - -
Amo20g2806 328 PANTHER OS10G0396666 PROTEIN 1 290 IPR044703 GO:0010252|GO:1905393
Amo20g2806 328 SMART LRR_CC_2 265 289 IPR006553 -
Amo20g2806 328 SMART LRR_CC_2 290 315 IPR006553 -
Amo20g2806 328 SMART LRR_CC_2 146 177 IPR006553 -
Amo20g2806 328 SMART LRR_CC_2 45 70 IPR006553 -
Amo20g2806 328 SMART LRR_CC_2 19 44 IPR006553 -
Amo20g2806 328 SMART LRR_CC_2 93 118 IPR006553 -
Amo20g2806 328 Gene3D Ribonuclease Inhibitor 85 178 IPR032675 -
Amo20g2806 328 Gene3D Ribonuclease Inhibitor 179 327 IPR032675 -
Amo20g2806 328 Gene3D Ribonuclease Inhibitor 1 84 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2806 Amo-Chr20 127308136 127310611 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2806 - - gmx:100786178 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2806 20 127308136 127310611 Amo20g2806 20 127308136 127310611 ECH