Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2729 ATGGAATTCGCTAATTTATTATTTTTATGCTCACTTGTGTGCTTGTTTTTTCCTTCAAGTGTAACTGCCTCGTCAAAGATCGCCCGAAGTTTCACCACTGATTCCAATCAGGTTGATGAACCCTTCAAGGTCGAAGAAGCTGAAACGGTAAACATACCTCCGCCCCCAACAGACAAGTTGCTTGTGTTGGGAGGCAATGGATTTGTTGGCTCACATATTTGTAGAGAAGCCTTAGATCGCGGTTTATCCGTTGCCAGTCTTAGCAGGTCTGGCAGGTCATCCTTGCATGATTCATGGGCTACCAATGTCATCTGGTATAAAGGGAACCTCCTGTCGGGTGATTCGTTGAAAGAAGCTCTCAATGGGGTCACTGCTGTCATCTCATGTGTTGGCGGTTTTGGCTCCAACTCATACATGTACAAAATTAACGGAACTGCTAACATCAATGCAATTAGAGCAGCTGCAGATCAAGGTGTTAAAAGATTCGTCTATATCTCTGCTGCTGACTTTGGCGTAGTTAATTTCTTATTGCGGGGTTATTATGAAGGAAAGAGAGCTGCTGAAACAGAGCTTCTGACCAGATTTCCTTACGGAGGAGTGATTCTGAGACCTGGGTTTATATACGGGACTCGAACTGTTGGGAGCTTGAAGATACCCCTTGGTGCAATTGGGTCTCCAATGGAGATGGTTCTCCAACATGCAAAGCCATTGAGCCAGATCCCACTTGTTGGACCTCTAATGACACCTCCGGTCAATGTTACGTCAGTTGCAAAAGTTGCGGTTAGAGCTGCAACGGACCCTGTTTTCCCTCCCGGTATCATTGATGTTTATGGAATTCAACGGTATAGTCAGCACAAATCAAAGTAG 867 0.451 MEFANLLFLCSLVCLFFPSSVTASSKIARSFTTDSNQVDEPFKVEEAETVNIPPPPTDKLLVLGGNGFVGSHICREALDRGLSVASLSRSGRSSLHDSWATNVIWYKGNLLSGDSLKEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAAADQGVKRFVYISAADFGVVNFLLRGYYEGKRAAETELLTRFPYGGVILRPGFIYGTRTVGSLKIPLGAIGSPMEMVLQHAKPLSQIPLVGPLMTPPVNVTSVAKVAVRAATDPVFPPGIIDVYGIQRYSQHKSK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2729 288 Gene3D - 54 277 - -
Amo20g2729 288 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED 22 286 - -
Amo20g2729 288 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 59 278 IPR036291 -
Amo20g2729 288 Pfam NAD(P)H-binding 64 208 IPR016040 -
Amo20g2729 288 PANTHER BNAANNG24990D PROTEIN 22 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2729 Amo-Chr20 125317455 125320995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2729 - - cam:101491147 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2729 20 125317455 125320995 Amo20g2729 20 125317455 125320995 ECH
Amo10g2290 10 80221405 80224939 Amo20g2729 20 125317455 125320995 hybridization