Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2723 ATGAAGAGGAATGCCTTTGCCGCTGCCGCCTCCGCTCTCTACCGCCGCCGCCCATCCCTGCCTATCTCTCCAAATTTACGGCATGAGAGTGCCACTGGAAGTGTCTTACGCAAATGCATGCCGCTGGAATATCTAGAACTTGTTGAGGTTGGTGAGAGGCTGCATTGCTGGTCGCCGTCTTGCTTGTTGCACCGGAATTCATATTCAACTGGCTTCACCAGTGTGCACGGTGAAACGCCATCTGCTGAATATGCGAGGAGGAGGAGGGAAACACTGGAAAATCAATTTGGGCGTGCCCTTGGAACTTACAGCTCCAAGAGCTTCAACGCTATCTACCGCTTTGGGCCCTTTTTGGCTCTGTACAGGGCAGCAATTATTTCATTTCATGTGTTAAGGCTAGCAATATGGCAGTTCTTCCTTCAAGACGTTGAAAAACGTGCAGTTAAGCTTGGGCAGGCATTGAGCACTAGACCTGATGTATTACCAAAAGTATACTGCCAAGAACTAGCTAAGTTACAGGATCAAATACCCCCATTTCCAACATATGCTGCAATCAGATCTATTGAAACCCAGCTTGGTCTTCCTATTTCTGATATTTTTAGTGACATTAGCCCTGCACCTATTGCAGCAGCATCCTTGGGGCAAGTTTACAAAGCTCACCTGCATTCTGGAGAGTTGGTAGCCGTTAAAGTTCAGAGGCCTGGTATGTCACTTTCATTGACCCTTGACGCCTTGTTATTCCATATGATTGGAGGGCAATTTAAACGATTTGCCAAGGCCCGCAAAGATCTTTTAGTGGCTGTAAATGAAGTGGTCAGGCACATGTTTGATGAAATTGATTATGTCCTAGAGGGGAAAAATGCTGAGCGCTTTGCTTCTCTATATTGTTGGTCTTCAAGTGGTACCAATGTCGAACACAAACGAAGGAAGTCCATCAAAGCTCCAAAAATATATTGGGACTATACATGTACCACTGTACTGACTATGGAGTGGATAGATGGAATTAAGCTTACAGATGAAAAGGGGTTGAAGGAAGCTTCTTTGAACAGAAGGGAACTCATTGATCAGGGATTATACTGCTCTTTGAGGCAACTACTTGAGGTTGGTTATTTCCATGCTGATCCTCATCCAGGAAATCTTGTAGCAGTTGGTGATGGATCACTTGCATACTTTGACTTTGGAATGATGGGGGATATTCCTAGGCATTACCGGATAGGTCTTATTCAAATTATTGTGCACTTTGTTAATCGTGACTCTCTGGGTTTGGCAAATGACTTTCTTTCTTTAGGATTTCTTCCTGAAGGGGTTGACATACATGGGGTTTCTGATGCACTGCAAGCATCATTTGCCCGTCGGACCAGTCGGACAGGTGAATCTCAAGATTTTCAGGGAATTATGAACCAACTATATGATGTAATGTATGAATTTAATTTCTCCCTCCCGCCAGACTATGCTCTTGTCATAAGAGCATTAGGATCACTAGAAGGCACGGCTAAAGTTCTAGATCCTGATTTTAAAGTCATTGAGAGTGCATATCCTTTTGTCATTGGGAGACTTATAGCTGACCCAAGTCCTGATATGAGAAAAATTTTGAGGCAGCTGCTTATTCGTAATAATGGATCCATAAGGTGGAGCCGGCTAGAGCGCCTGATAGCAGCAATATCTGAACAGGCTTCTGATTTAAATGGAGATCCAAGTTCTGAGAAGCATTTTAGTCCCGTTTGGAAATTATTTGATATGCATGCTGTGGTTGATTCCACTGAAGATCTTTTATTATTCATATTATCAGACAAGGGTCTGAGAGTGCGTCTTTTCCTTCTTCGGGATATAGTTGAAGCAGCTGATGCATTTCTGCAAGATGAAGTGATTGATTGTGTGTTAAATGAGAACCCTCAAGAACAGAATATCTTCTTATTCGAGGAGCGGGCTATGCTAGGAAGGATCGGAAAGGGATTTCAATACTTTCGTGAGGTGGTGAAGCTGGCACCTGAGGAGTGGACAGCGATGCTAATGAGGATGGCACTGAAACCTGAGGTCCATAAATTTGTTATAGACATTATTTCAGCGTTGGCTACACATTCCAGCCAGAAATTGCAAGTAGCTTCTTGGCTATATTTATCAAGGCTTGTTCACAGATGGTCAAATTCAGGTAGATATACTACACACCCTTGA 2172 0.4351 MKRNAFAAAASALYRRRPSLPISPNLRHESATGSVLRKCMPLEYLELVEVGERLHCWSPSCLLHRNSYSTGFTSVHGETPSAEYARRRRETLENQFGRALGTYSSKSFNAIYRFGPFLALYRAAIISFHVLRLAIWQFFLQDVEKRAVKLGQALSTRPDVLPKVYCQELAKLQDQIPPFPTYAAIRSIETQLGLPISDIFSDISPAPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQFKRFAKARKDLLVAVNEVVRHMFDEIDYVLEGKNAERFASLYCWSSSGTNVEHKRRKSIKAPKIYWDYTCTTVLTMEWIDGIKLTDEKGLKEASLNRRELIDQGLYCSLRQLLEVGYFHADPHPGNLVAVGDGSLAYFDFGMMGDIPRHYRIGLIQIIVHFVNRDSLGLANDFLSLGFLPEGVDIHGVSDALQASFARRTSRTGESQDFQGIMNQLYDVMYEFNFSLPPDYALVIRALGSLEGTAKVLDPDFKVIESAYPFVIGRLIADPSPDMRKILRQLLIRNNGSIRWSRLERLIAAISEQASDLNGDPSSEKHFSPVWKLFDMHAVVDSTEDLLLFILSDKGLRVRLFLLRDIVEAADAFLQDEVIDCVLNENPQEQNIFLFEERAMLGRIGKGFQYFREVVKLAPEEWTAMLMRMALKPEVHKFVIDIISALATHSSQKLQVASWLYLSRLVHRWSNSGRYTTHP* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2723 723 CDD ABC1_ADCK3-like 171 426 - -
Amo20g2723 723 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 51 703 - -
Amo20g2723 723 Pfam ABC1 atypical kinase-like domain 171 423 IPR004147 -
Amo20g2723 723 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 51 703 - -
Amo20g2723 723 SUPERFAMILY Protein kinase-like (PK-like) 173 513 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2723 Amo-Chr20 125204805 125211177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2723 K08869 - gmx:100776761 1132.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2723 20 125204805 125211177 Amo20g2723 20 125204805 125211177 ECH
Amo10g2286 10 80036141 80042331 Amo20g2723 20 125204805 125211177 hybridization