Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2715 ATGTTTCATTCGGCGAGTGTTCAACAAGAACATGGTCTTGTCCATGATTTTGTATCCCATATTGGTCGATTTGCCTTTGATTCCAGGTTCTTCACCTTTGGCTCTGATAATTTATCAAATTACTTGCACTTCAATGTCACAAAGCAAAGTGTGTGTTCTGCTGCTTCTCTTAGCTTGAAACTTGGAGGCAGAGGGGATTCGAATTTGAATTTCAGGAGGTTTTTTAATGATTTCAACACAGCTATTAGGTTCCACACTCAGAAATTGCCAATTGGATTTGATTCTCCCAGCCTTGATTCTGGGGATAACAATCACTGTAACAATGGTAATACTCTTGATGAGTGTGATGTTATTCAGGACGATAGAGGGACATTGAGTGGTGTTGATCCTCAGAAGCCAAAAAAGGTTTTGATTTTGATGAGTGACACTGGTGGGGGTCACAGAGCTTCTGCAGAAGCTATAAGGGCAGCTTTCCATGAAGAATTTGGGGACCAATACCAGGTTTTTGTTGTTGACTTGTGGACTGAGCACACCCCTTGGCCATTCAATCAACTTCCTCGGACATATAGCTTTCTGGTGAAACATGGATCATTGTGGAAAATGACCTATTATGGAACTGCTCCGCGTGTGGTGCACCAGTCAAATTTTGCTGCAACTTCAACATTTATAGCTCGTGAGGTTGCCAAGGGGCTAATGAAATATCAGCCAGATATAATAATCAGTGTTCACCCATTGATGCAACATGTTCCTCTTCGAATTTTGAGAGCAAAGGGTCTTTTAAACAAGATTATCTTTACAACGGTTGTCACAGATTTAAGTACTTGCCATCCTACTTGGTTTCATAAGCTTGTAACTCGATGCTATTGTCCGACCACAGACCTTGCGAAAAGGGCGCTCAAAGCTGGACTCCAGCAATCACAGATAAAGATTTTCGGTCTACCAGTTCGACCTTCCTTTGTTAAGCCTGTTCAATCAAAGGATGAACTTAGGAAAGCCTTAAGCATGGATGAGGATCTTCCTGCTGTACTACTAATGGGGGGAGGTGAAGGTATGGGTCCCATTGAGGCTACTGCTAAGGCACTTGGAGATATGTTGTATGATAAGAGCAGTGAGGCTCCCATTGGTCAAATACTTGTTATTTGTGGACGTAATCAGAAGCTTGCTGACAAATTGGCTTCAATTAATTGGAAGGTTCCTGTGCAGGTAAAGGGATTTGTCAGCAAAATGGAGGAATGCATGGGAGCTTGTGATTGCATCATTACAAAGGCCGGCCCGGGGACAATTGCCGAGGCCATGATCCGAGGCCTCCCTATCATTTTGAATGGTTATATTGCTGGCCAGGAAGCTGGGAATGTACCCTACGTAGTTGAAAATGGATTCGGCAAGTTCTCAAAATCTCCGAAGAAGATAGCTAAAATTGTAGCTGAGTGGTTCGGTCCAAAAGCAGAAGAACTAAAAACTATGTCTCAAAACGCGTTGATGTTTGCACGGCCTGATGCTGTGTTCAAGATTGTTCATGACCTTGATGAACTTGTGAGGCAAAGAAGTTCTTTGCCACACTACTCATTTACCCCTTAA 1578 0.4284 MFHSASVQQEHGLVHDFVSHIGRFAFDSRFFTFGSDNLSNYLHFNVTKQSVCSAASLSLKLGGRGDSNLNFRRFFNDFNTAIRFHTQKLPIGFDSPSLDSGDNNHCNNGNTLDECDVIQDDRGTLSGVDPQKPKKVLILMSDTGGGHRASAEAIRAAFHEEFGDQYQVFVVDLWTEHTPWPFNQLPRTYSFLVKHGSLWKMTYYGTAPRVVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLNKIIFTTVVTDLSTCHPTWFHKLVTRCYCPTTDLAKRALKAGLQQSQIKIFGLPVRPSFVKPVQSKDELRKALSMDEDLPAVLLMGGGEGMGPIEATAKALGDMLYDKSSEAPIGQILVICGRNQKLADKLASINWKVPVQVKGFVSKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGFGKFSKSPKKIAKIVAEWFGPKAEELKTMSQNALMFARPDAVFKIVHDLDELVRQRSSLPHYSFTP* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2715 525 Pfam Glycosyltransferase family 28 C-terminal domain 374 440 IPR007235 GO:0016758
Amo20g2715 525 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 104 518 - -
Amo20g2715 525 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 134 511 - -
Amo20g2715 525 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 147 315 IPR009695 GO:0009247|GO:0016758
Amo20g2715 525 CDD GT28_Beta-DGS-like 136 513 - -
Amo20g2715 525 Gene3D Glycogen Phosphorylase B; 323 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2715 Amo-Chr20 125035685 125038368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2715 4 524 Glycosyltransferase AT4G31780 64.286 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2715 K03715 - gmx:547469 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2715 20 125035685 125038368 Amo20g2715 20 125035685 125038368 ECH