Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2713 ATGCAACAAGAAGAGGAAAATCTGAAGGATCCCTGTGGTGAAGAAAAAGAAGGAGAAGAAGAAGAAGATGAAGAAAGGAAGAAGGGTAGTGTCTGGTGTGGTTGTATCTGCATCCCTGTGCATTGGTTTAAGATGCTATCAAGGGAAATGCATTGGAGCTTTGTGTTTGGTGTGATAATAGTTTATGGAGTGAGTCAAGGACTTGGTGGAGGCCTTTCTGGTGTTGGAACAAAGTATTACATGAAAGATGTTCAGAAAGTGCAGCCATCACAAGCACAGGTTTATGCAGGAATCACTTCCATTCCTTGGATTGTTAAGCCTTTGTGGGGTCTTCTTACAGATGTTCTTCCCATTCTCGGATATCGCAGGCGACCTTATTTCATTTTTGCTGGTTTCATAGGAGTGATTAGCATGGTTCTATTATCTTTGCATGAAAACCTGCACATTATGTTGGCCATTTTGGCATTAACTGCTAGTAGTACTGGTGTGGCTATAGCTGATGTTACCATTGATGCTTGTGTGGCACAGAACAGTATCACCCATCCTTCACTGGCCGCCGACATGCAAAGTTTATGCGCCTTCAGTAGTTCTGTAGGAGCATTATTAGGATTCTCCATTGGTGGTATCTTTGTTCATCTCATAGGCCCTATGGGGGTGTTTGGTTTGATGACAATCCCTTCTGGACTTTTAATTTTGCTTGGGTTTATGCTTGATGAGCCTTATATGCCTAACTTTGCCTACAAACAGGTGAACCAAAAGTTTGTTGATGCTAGCAAGTCTATGTGGACAACACTGAAGAAGGATGATGTATGGAAGCCTTGTTTATACATGTATTTATCATATGCTTTGAGTCTGAATATCTTTGAAGGATTGTTCTATTGGTATACAGATCCAAAAGCTGGGCCATCTTTCTCTCAGGAGACAGTTGGTTTCATATTCTCAATTGGTTCAGTTGGGGCCCTTTTAGGTGCATTACTATATCAGTATGCATTAAAGGATTATGCATTCAGAGACCTCCTCTTCTGGACTCAGCTAATATATGCATTATCAGGCATGGTAGATTTGGTTATGGTGTTGAGATTGAACCTCAAGTTTGGTATACCAGATTACTTGTTTGTAATGATAGTTGATAGTGTTGCTCAAATGACTACTAGACTCAAATGGATGCCCATGCTTGTACTCAGTGCAAAGCTTTGCCCTTCAGGTATTGAAGGCACATTCTTTGCATTATTAATGTCCATTGATAACTTTGGAGTGCTATCTTCTTCATGGGGTGGAGGACTTTTGCTTCACTTGTTTAAGATTACAAGAACAAAGTTTGATAATCTTTGGTTAGCTATTTTGCTGAGGAACATCTTAAGGATCACACCACTTTGCTTGCTTTTTTTGGTGCCTAAAGCTGATCCTAACTCTTCCATTCTTGCAACAAGTGAAAGCTTGGATTCAGAAGTGGTTATTGAAACTTCTGAAATGGAGAATAATATTGAATTGGTTTCACTTGTGAACAATGTTGATGCCATGTAG 1524 0.4003 MQQEEENLKDPCGEEKEGEEEEDEERKKGSVWCGCICIPVHWFKMLSREMHWSFVFGVIIVYGVSQGLGGGLSGVGTKYYMKDVQKVQPSQAQVYAGITSIPWIVKPLWGLLTDVLPILGYRRRPYFIFAGFIGVISMVLLSLHENLHIMLAILALTASSTGVAIADVTIDACVAQNSITHPSLAADMQSLCAFSSSVGALLGFSIGGIFVHLIGPMGVFGLMTIPSGLLILLGFMLDEPYMPNFAYKQVNQKFVDASKSMWTTLKKDDVWKPCLYMYLSYALSLNIFEGLFYWYTDPKAGPSFSQETVGFIFSIGSVGALLGALLYQYALKDYAFRDLLFWTQLIYALSGMVDLVMVLRLNLKFGIPDYLFVMIVDSVAQMTTRLKWMPMLVLSAKLCPSGIEGTFFALLMSIDNFGVLSSSWGGGLLLHLFKITRTKFDNLWLAILLRNILRITPLCLLFLVPKADPNSSILATSESLDSEVVIETSEMENNIELVSLVNNVDAM* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2713 507 MobiDBLite consensus disorder prediction 1 24 - -
Amo20g2713 507 CDD MFS_FBT 57 462 - -
Amo20g2713 507 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 17 505 - -
Amo20g2713 507 Gene3D MFS general substrate transporter like domains 47 449 IPR036259 -
Amo20g2713 507 SUPERFAMILY MFS general substrate transporter 52 462 IPR036259 -
Amo20g2713 507 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 17 505 IPR039309 -
Amo20g2713 507 Pfam BT1 family 66 229 IPR039309 -
Amo20g2713 507 Pfam BT1 family 273 468 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2713 Amo-Chr20 125001671 125004508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2713 - - ccaj:109816000 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2713 20 125001671 125004508 Amo20g2713 20 125001671 125004508 ECH