Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2712 ATGGGTAGCCAAGTTGCTTCAACCAATGATCGTTCAAGGATGCATTGGACCCCATCAATGGAACGTTATTTTATTGATGTTATGTTGGAGCATGTGCAAAGAGGGAATAGAGTTGGATACACCTTCAACAAGCATGCTTGGAGTGACATGCTGGCAAGGTTCAATGCCAAATTCGGTTCCCAATGTGACAAGGATGTGTTGAAGTCTCGGTATTCTAGTTTGTGGAAGCAGTTCCATGATGTCAAGAACATTCTTTGTCATGCTGGTTTTTCATGGGATGCTGCAAGGCAAATGGTGGTGGCTGATGATGTTTCTTGGGATGAATACCTCGAGACTCAAACTGATGCAAGATGTTACAGGACAAAACCAGTGCTGAATTTCGATGATTTGTGTGTGATATATAGTCATACAAGTGCTGATGGAAGGTATAGTTTATCAAGCCATGATGCATGTGTTAATTCTGAAGTTCAAAGAGGTGATGGAATGGGAAGCAATGCTGTATTGAATAGTGGTCTGAGAACAGATTGGAGTGCTTCAATGGACCAGTATTTTATAGAGCTTTTGCTTGATCAACTGAGCAGGGGCAACATAATCAATCATCAGTTCAGTAAAAAGGCTTGGACAGATATGCTTGACATGTTTAAGGCTAAATTTGGCTCTCACTTTTGTAAGAGGATTTTGAAGAATCGACTGAAGAAACTGTTGAAGTATTACTGTGACATAACAAACCTTTTAAAACAAGGATTTTTATGGGATGATCAACAACGAATGATTGCTGCTGATGAAAGTGTCTGGGATGCTTATGTCAAGGCACATCCACATGCACGAACATATAGATTGAAAATTTTGCCAAACTATCGTGATTTAGAATTAATATTCAGAAATGTATCTGATGATGAGATCAGTAATTTGCATCAGGAACAAAGTCATGACGTGACATCAGGAAAAAAGGCTGGTGAAGGAAAAGGATGCCGCAATCCTAGTGGATCTGATCGTACTAGAACATATTGGACACCACCAATGGATCAATGCCTTATTGACTTGTTATTAAAGCAGGTGAAAAGTGGAAACAGGCTTGGGCAGACATTCATTACCCAGGCTTGGAATGACATGATTACCTCATTCAATGCACAATTCAAATCTCAATGTGACAAAGAAGTTCTGAAGAATCGTTACAAACATTTGAGGAAACAGTTTAATGATGTGAACAATCTTCTTCAGCAGAGTGGGTTCTCATGGGATGATAAGAGAGAAATAGTTGCTGCACAGGATCATGTTTGGCATGCTTATATAAAGGTACATCCTGAAGCTCGATCACTAAGAGTTAAAACTTTGCCAGGCTATCGCAAACTGTGTGTTATATTTGGAGAGGAATGCTCTGGTACAAGATATATCCAGTTATCGCGCAATGCAGACCCCAGTTGTGAAATGCCAATGTCGATAGCAGGTGAACAGAAAAATAGCACTCTTCATGGTGTTTGTGGTGCTGCTTCTACAATAGATTGGACGGAATCAAAGGAATGCTGTTTTATTGACCTTATGATTGAGCAAGTAAATAGAAGAAATATGATTGGAAACTTGTTCAATGAGCAAGCTTGGACTCATATGACTGAAGCATTTTGCGCTAAATTCGGACATCAGTATGACAAGCAGTTTCTAGTGGATCAATATCTCTGCTTGATGAAACTACATGATGACATTGGCGATCTTCTCAGTCATGGTGGATTTGCATGGGATGAAACCCTACAAATTATAGTTGCCGAAAATGATACATGGGATGCATACATTAAGGATCACCCAGATGCCATCTCATATAGAAACAGGATTTTGTATCTTTACAATGATCTGCGCAAGGTATTTGGAAACATTGCGTCAGATGCGAGAGTGAGTTCTCAGGAGCAACTTCACCTGATGGATGCAAATGACATTGCCATTGAAATGGATATGGATGGAAACTTGGTTGTGAGTGACAACACTGAAATATTAATTCAAGATAGAAGAGTTTCAAATGATGAAATGGATATGGTTGGAATATCAGGGAATTTGAATGTGACTAGTAACAATGGAATATCAAACCAAGATACAGAAAGGCCAAGGGAAATGGATATAAATGGAAGATCTGGAGATTTGGTTGTGACTGGAAAAAGAAACAAAATGGATACAAATGGATCGTGTCGAAAACCACAGCATGTTAAGAAAAGGCCGAGGGCAAAGGCAATGGACTCTAGACCTCCCAAGAAGAACATGAGAGTAAAAGAAGCATTGTCTGAGATGGCAAGTGCTGTGAAGTCATTGATGAACAACAAAGAGAGAAACGACTATAATTCCCCATTGGAGAATGCTTTGAGTGAACTTCAAGCTATGCCTGACATCGATGACGAGCTGGTAATGGATGCATGTGATCTATTGGAGGATGAGAGAATGGCCAAGATATTTCTAGCCTTGGATATCTCTTTGAGGAAGAAGTGGTTGCTTAGAAAGCTTCGTCAGTAA 2493 0.3967 MGSQVASTNDRSRMHWTPSMERYFIDVMLEHVQRGNRVGYTFNKHAWSDMLARFNAKFGSQCDKDVLKSRYSSLWKQFHDVKNILCHAGFSWDAARQMVVADDVSWDEYLETQTDARCYRTKPVLNFDDLCVIYSHTSADGRYSLSSHDACVNSEVQRGDGMGSNAVLNSGLRTDWSASMDQYFIELLLDQLSRGNIINHQFSKKAWTDMLDMFKAKFGSHFCKRILKNRLKKLLKYYCDITNLLKQGFLWDDQQRMIAADESVWDAYVKAHPHARTYRLKILPNYRDLELIFRNVSDDEISNLHQEQSHDVTSGKKAGEGKGCRNPSGSDRTRTYWTPPMDQCLIDLLLKQVKSGNRLGQTFITQAWNDMITSFNAQFKSQCDKEVLKNRYKHLRKQFNDVNNLLQQSGFSWDDKREIVAAQDHVWHAYIKVHPEARSLRVKTLPGYRKLCVIFGEECSGTRYIQLSRNADPSCEMPMSIAGEQKNSTLHGVCGAASTIDWTESKECCFIDLMIEQVNRRNMIGNLFNEQAWTHMTEAFCAKFGHQYDKQFLVDQYLCLMKLHDDIGDLLSHGGFAWDETLQIIVAENDTWDAYIKDHPDAISYRNRILYLYNDLRKVFGNIASDARVSSQEQLHLMDANDIAIEMDMDGNLVVSDNTEILIQDRRVSNDEMDMVGISGNLNVTSNNGISNQDTERPREMDINGRSGDLVVTGKRNKMDTNGSCRKPQHVKKRPRAKAMDSRPPKKNMRVKEALSEMASAVKSLMNNKERNDYNSPLENALSELQAMPDIDDELVMDACDLLEDERMAKIFLALDISLRKKWLLRKLRQ* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2712 830 MobiDBLite consensus disorder prediction 304 318 - -
Amo20g2712 830 Coils Coil 385 405 - -
Amo20g2712 830 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 497 642 - -
Amo20g2712 830 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 715 830 - -
Amo20g2712 830 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 172 300 - -
Amo20g2712 830 MobiDBLite consensus disorder prediction 304 333 - -
Amo20g2712 830 PANTHER EXPRESSED PROTEIN 1 163 - -
Amo20g2712 830 PANTHER EXPRESSED PROTEIN 317 476 - -
Amo20g2712 830 PANTHER EXPRESSED PROTEIN 497 642 - -
Amo20g2712 830 MobiDBLite consensus disorder prediction 684 749 - -
Amo20g2712 830 Pfam Myb/SANT-like DNA-binding domain 502 595 IPR024752 -
Amo20g2712 830 Pfam Myb/SANT-like DNA-binding domain 15 109 IPR024752 -
Amo20g2712 830 Pfam Myb/SANT-like DNA-binding domain 176 268 IPR024752 -
Amo20g2712 830 Pfam Myb/SANT-like DNA-binding domain 336 430 IPR024752 -
Amo20g2712 830 PANTHER EXPRESSED PROTEIN 715 830 - -
Amo20g2712 830 PANTHER EXPRESSED PROTEIN 172 300 - -
Amo20g2712 830 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 317 476 - -
Amo20g2712 830 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2712 Amo-Chr20 124981534 124985478 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2712 - - aprc:113865140 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2712 20 124981534 124985478 Amo20g2712 20 124981534 124985478 ECH