Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2674 ATGGCTTTGGGATTCTTCGGCCTCGCTCTCTTCCTCTTCCTTACCCTCGATTATGACGTCGGTGCTTCTCCATCCGCTTCCGCTTCCGCCTCTGCTGCCTCCTCGGAAGGCGTCGAGGTGCACATCACTTATGGATCGGTTATAAAGCTTATGCACGAGAAGACCAAGTTTCGTTTGCATTCCCATGATGTTCCGTATGGTTCTGGCAGTGGACAACAATCGGTTACTGGTTTTCCCAATGTTGATGATTCCAATAGTTACTGGATTGTTAGACCTGAGCCAGGAACTTCTGCTAAACAAGGTGACACCATTAAAAGTGGTACAATCATTAGATTGCAGCACATGAGGACCAGGAAGTGGCTGCACAGCCATTTGCATGCTTCCCCAATATCAGGCAATCTCGAGGTGAGTTGCTTTGGAGGAGAGTCTGAGTCTGACACTGGGGACTATTGGAGGCTTTTTATAGAAGGAAGTGGGAAGACATGGAAACAAGATCAGAGGATCAGGCTTCAGCATGTGGACACCGGAGGCTATCTACATAGTCATGATAAGAAATACTCTCGGATTGCTGGAGGGCAGCAAGAGGTTTGTGGTTTACGTGAAAAACGTGCGGACAATGTCTGGTTGGCAGCTGAAGGCGTCTATCTTCCTGTTACTGAAACCAAATGA 669 0.4798 MALGFFGLALFLFLTLDYDVGASPSASASASAASSEGVEVHITYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPEPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWRLFIEGSGKTWKQDQRIRLQHVDTGGYLHSHDKKYSRIAGGQQEVCGLREKRADNVWLAAEGVYLPVTETK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2674 222 PANTHER MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED 1 222 - -
Amo20g2674 222 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 222 - -
Amo20g2674 222 ProSiteProfiles MIR domain profile. 101 156 IPR016093 -
Amo20g2674 222 SUPERFAMILY MIR domain 40 213 IPR036300 -
Amo20g2674 222 Pfam MIR domain 74 206 IPR016093 -
Amo20g2674 222 Gene3D - 25 222 - -
Amo20g2674 222 ProSiteProfiles MIR domain profile. 39 93 IPR016093 -
Amo20g2674 222 ProSiteProfiles MIR domain profile. 159 213 IPR016093 -
Amo20g2674 222 SMART mir_2 159 213 IPR016093 -
Amo20g2674 222 SMART mir_2 39 93 IPR016093 -
Amo20g2674 222 SMART mir_2 101 156 IPR016093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2674 Amo-Chr20 124061933 124064642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2674 - - gmx:100811638 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2674 20 124061933 124064642 Amo20g2674 20 124061933 124064642 ECH