Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2599 ATGTTATCCTATATGCAGTATAGGGAACCAGGACCCCTGTTATGGCGTGGTTTCACATTGCAAGAAATTGCACACCAGTGTTTTTCCAATAAATATGACAATGGAAAAGGACGGCAAATGCCAATACATTATGGGTCCAACAAGCATAATTACTTTACTGTAGCATCAACTGTTGCCACACAAGTTCCCCATGCTGTTGGAGCTGCATATTCTTTAAAGATGGACAAAAAAGATGCATGTTCTATCACTTACTTTGGTGATGGTGGCTCAAGTGAGGGAGATTTCCATGCTGCCTTAAATTTTGCAGCAGTTATGGAGGCGCCAGTTATTTTCCTGTGCCGAAACAATGGATGGGCTATCAGCACCCCAACTTCGGATCAATTTCGAAGTGATGGTGTTGTCGTGAAAGGACAGGCATATGGAGTCCGCAGCATTGAGTAG 441 0.4331 MLSYMQYREPGPLLWRGFTLQEIAHQCFSNKYDNGKGRQMPIHYGSNKHNYFTVASTVATQVPHAVGAAYSLKMDKKDACSITYFGDGGSSEGDFHAALNFAAVMEAPVIFLCRNNGWAISTPTSDQFRSDGVVVKGQAYGVRSIE* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2599 146 Gene3D - 2 146 - -
Amo20g2599 146 Pfam Dehydrogenase E1 component 5 145 IPR001017 GO:0016624
Amo20g2599 146 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 4 145 IPR029061 -
Amo20g2599 146 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 5 145 - -
Amo20g2599 146 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 5 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2599 Amo-Chr20 121486849 121487814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2599 4 131 Acyl Lipid Metabolism Gene Families AT5G09300 82.812 2.76e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2599 K00166 - oeu:111397063 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2599 20 121486849 121487814 Amo20g2599 20 121486849 121487814 ECH