Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2579 ATGCCGATCGAGATGCCGCGAGGGCTTCCATTCTCGGTGGACACGTGGAGTTCCTCATCCATGGCCTCCAAGAGGCACCATTTCTTGAGCCACGCCCACAGGGACCATTCTTCCGGCATCTCTTCCTACTTCTCCSTCCCTATTTACTCCACTCTTCTCACCAAAAACCTCCTCCTCCGCCACTTCCCGCACCTTCAGCCACATGCTGCWTCCTTCTTTACCATCGAGGTAGGTCAATCCTTGACCCTCGACGACCCTTCTGGCCCCTTCACTGTCACTGCTTTCGACGCCAATCACTGCCCTGGAGCTGTGATGCTCCTGTTTGAGGGCAAATTTGGAAATATTCTACACACAGGGGACTGCAGGCTGACCCCTGAATGTGTACGGAACTTGCCTGCTAAGTATGTTGGGAAGAAAGGGAAACCGCCGCCTTGCGCGCTTGATTGTGTCTTCTTGGATTGTACATTCGGTAGCTTCTCTCAGGCGATGCCTAGCAAGAATTCTGCTGTTCAGCAGGTTGTTAATTGTATATGGAAGCATCCTGATGCATTGACGGTGTATTTGATATGTGACATGCTTGGTCAGGAAGAGATACTTCTTAGTGTTTCCAAAACATTTGGAAGCAAGATTTATGTTGATAGAGCTGAAAATCCGGATTGTTTCAAGAATTTAGAACTTACTGCGCCTGAAATACTGTGTGAAGATCGATTGTGTCGTTTCCATTTGTTCGATGGATCCCCGGGGCTGTATGAGAGAGCTAAAGCAAAGCTGTTAGAGGCCAAGGCTGCTCCTCAGCCTGAACCACTATTTGTCCGCCCTTCTTCGCAGTGGTATGCCATTGAAGAAGGGTTCTCTGACATTGAAAATGCTAGGAAAAGGAGGATTAGCGAAGCAGTTGTTGATCAGTTTGGTGTTTGGCATGTCTGCTATTCAATGCACTCGTCCAAGGAAGAATTGGAATGGGCACTACAACTTCTTGCACCTAAATGGGTTGTTTCGACAACTCCCAWCTGTAGGGCTATGGAGCTGGATTATGTCAAGAAACACTGTTTTAAGTCTAAAGCTGCTCTCAGTAGCTCCATATGGAAGCTTCTTGATATAAATGTGGAAGCTTCTGASGATGCTGATGCATTCATGAAATCTGTGAGCTGTTCTCCRGTGGTTGAAGAGACACCTCAGCCTTTTGCTCGAATTGAATCACCAGTGAAACAGCGCACAGACACTATAAAACTTGTGTCTCTTCCTGCTCAAARATTGCCTGTCACGTTATTTGGAAGAGCAAGGCTGAGTCTTCAAGATTCGAGCTTTTCACGGGTAGGGTGTAATAGCTTACCTACTAATGTCCCCACGCAAGCAATTTCAAGCAATGCAGGAAAAGAAGTCCTGGATGGCRGGAAGGATGCTGAGGCGAAATTGGRGAGATCACCGGAAAGAAAAGATTTACGTCAAGTTAAGTATMAGCCATCTGAGGATCAGGAAATAAGAGATTTACATCAAGTTAAGTATCAGCAATCTGATGATCAGGAATCTGAGGTTCAGGAAATAATAGATTTACATCAAGTTAAGTATCAGCAATCTGGGGATCAGGAATCTGAGGTTCAGGAAATAATAGATTTGCATCAAGTTAAGTATCAGCAATCTGATGATCAGGAATCTGAGGTTCAGGAAATAATAGATTTACATCAAGTTAAGTATCAGCAATCTGAGGATCAGCAATCTGAGGTTCAGGAAATAAGAGTTAATAATAGTCGCTCTTATTTAAATATTAGACCTTCAGGCATGAGTGATAGTGTAAGAAAGTTGTACAGGCGTATGAATGTTCCCGTGCCTGAACCTCTTCCATCATTGGTGAAACTTATGAATTCCAATAAACGTGCCAAGAGAGGAATTTTTTAG 1896 0.4441 MPIEMPRGLPFSVDTWSSSSMASKRHHFLSHAHRDHSSGISSYFSXPIYSTLLTKNLLLRHFPHLQPHAASFFTIEVGQSLTLDDPSGPFTVTAFDANHCPGAVMLLFEGKFGNILHTGDCRLTPECVRNLPAKYVGKKGKPPPCALDCVFLDCTFGSFSQAMPSKNSAVQQVVNCIWKHPDALTVYLICDMLGQEEILLSVSKTFGSKIYVDRAENPDCFKNLELTAPEILCEDRLCRFHLFDGSPGLYERAKAKLLEAKAAPQPEPLFVRPSSQWYAIEEGFSDIENARKRRISEAVVDQFGVWHVCYSMHSSKEELEWALQLLAPKWVVSTTPXCRAMELDYVKKHCFKSKAALSSSIWKLLDINVEASXDADAFMKSVSCSPVVEETPQPFARIESPVKQRTDTIKLVSLPAQXLPVTLFGRARLSLQDSSFSRVGCNSLPTNVPTQAISSNAGKEVLDGXKDAEAKLXRSPERKDLRQVKYXPSEDQEIRDLHQVKYQQSDDQESEVQEIIDLHQVKYQQSGDQESEVQEIIDLHQVKYQQSDDQESEVQEIIDLHQVKYQQSEDQQSEVQEIRVNNSRSYLNIRPSGMSDSVRKLYRRMNVPVPEPLPSLVKLMNSNKRAKRGIF* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2579 631 Pfam DNA repair metallo-beta-lactamase 232 338 IPR011084 -
Amo20g2579 631 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 1 629 - -
Amo20g2579 631 SUPERFAMILY Metallo-hydrolase/oxidoreductase 25 336 IPR036866 -
Amo20g2579 631 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 629 - -
Amo20g2579 631 Gene3D - 162 313 - -
Amo20g2579 631 Gene3D - 10 334 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2579 Amo-Chr20 120733090 120735104 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2579 K15340 - gmx:100807948 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2579 20 120733090 120735104 Amo20g2579 20 120733090 120735104 ECH