Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2555 ATGAATGATGAACATTATCATCGTTTGCTCCTCTTTATAATGGTAGTGATCGTATCCGCTGCGCCTAACCTACAATCTTGTGATGGTGGAAAGATAATGATGGAATACATSGGAGCAACAGGGGCACAAGTAACATTCAATTCAGTTCCAATAGAAGAAGGGATTGATTTCCATTTCATTCTTGGGTTCGCCATTGATGCAGACGCTTCCGGCAATGCCCAAAACGGAAAGTTTTCYGCATATTGGYCMGAATCGTTGACACCWGAATCTGTTGCAGCCATTAAGGCACGCCATACCAATGTCAAAGTCTTGGCTAGCCTCTCTGGTTGGAGTCTGCACGACAAAGTCATACGTTGGTATGACCCAAAAGACACMCACCTATGGATTTCAAATGCATTCTCATCTCTAAGGTCTTTAGCACTCACTTACCACCTTGATGGCATAGACATTGACTATGAAGTTTTCCCAAGAAATAAAAACTATACTAGTTTTGCTTATTGTGTTGGTGAGCTCATAACTCTTCTGAAGAAACATAGTGTTATTTCTGTGGCCACTATTGCTCCCTATCACCTAACTGTTGAAGCCTATATGGAACTCTTCAAAGGTTACAATAATGTTATTGATTATGTTAACCATCAATTCTATACCGACAAAGTTTTGACTCCTCAAAGGTACTTAGAAGATTTTAATATTCGAGTAACGCAATTTGATAGGAATAAGTTGCTTCCTAGCTATGAAGTCAATGGAAGGGGTATTCAYGGGGATGCATTTTTTGGAACTCTGAYTTTGTTGCYAGAAAATGGATTTGAGGTRGGAGGCATTATGATCTTCTCAGCCGATGCATCTTCTTCCAACAACTATTTATATGAGAGAAGATCACAAGCATTTTTGCTCAACTCTACCGCTACATGA 912 0.3936 MNDEHYHRLLLFIMVVIVSAAPNLQSCDGGKIMMEYXGATGAQVTFNSVPIEEGIDFHFILGFAIDADASGNAQNGKFSAYWXESLTPESVAAIKARHTNVKVLASLSGWSLHDKVIRWYDPKDTHLWISNAFSSLRSLALTYHLDGIDIDYEVFPRNKNYTSFAYCVGELITLLKKHSVISVATIAPYHLTVEAYMELFKGYNNVIDYVNHQFYTDKVLTPQRYLEDFNIRVTQFDRNKLLPSYEVNGRGIHGDAFFGTLXLLXENGFEVGGIMIFSADASSSNNYLYERRSQAFLLNSTAT* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2555 303 PRINTS 2-S globulin family signature 49 68 IPR000677 -
Amo20g2555 303 PRINTS 2-S globulin family signature 91 109 IPR000677 -
Amo20g2555 303 PANTHER CHITINASE 2-LIKE 25 302 - -
Amo20g2555 303 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 31 303 IPR001223 GO:0005975
Amo20g2555 303 Pfam Glycosyl hydrolases family 18 58 215 IPR001223 GO:0005975
Amo20g2555 303 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Amo20g2555 303 Gene3D Glycosidases 30 300 - -
Amo20g2555 303 PANTHER CHITINASE 2-LIKE 25 302 - -
Amo20g2555 303 SUPERFAMILY (Trans)glycosidases 28 295 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2555 Amo-Chr20 119956617 119957617 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2555 - - ahf:112718291 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2555 20 119956617 119957617 Amo20g2555 20 119956617 119957617 ECH