Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2475 ATGTCGTTGCTGATGAGCCTTGCTTGCTTCGTTGTATTTGCAACAGCAACAAGGGACTTGGCCATGAAGGCAAAACAACACCAAGACCTATCTATCAGAATCAGTAGGCTTCAAGGGAAGAATAGTGATGATAACAATGAAGAAGAGGCAGTGAATTGCTGGGATTCGCTATTGGAGTTGAAATCTTGTAGCAATGAGATTGTTCTGTTCTTCTTGAATGGTGAGTCTCACCTTGGTCACGAATGTTGCCATGTAATTTATGTGTTTACACGTAATTGTTGGCCTGCATTGCTCACTTCTTTCGGTTTCACTGTTGAAGAAACTAATATCATACGAGGCTATTGTGATGCTGCTGCTCCTTCTGATCATGATAAAGCTCCTGCTTTCGCACCTCTTCCACCTGCAAAATGTCCTATATAG 420 0.4214 MSLLMSLACFVVFATATRDLAMKAKQHQDLSIRISRLQGKNSDDNNEEEAVNCWDSLLELKSCSNEIVLFFLNGESHLGHECCHVIYVFTRNCWPALLTSFGFTVEETNIIRGYCDAAAPSDHDKAPAFAPLPPAKCPI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2475 139 PANTHER EGG CELL-SECRETED PROTEIN 1.4 2 122 - -
Amo20g2475 139 Pfam Prolamin-like 52 116 IPR008502 -
Amo20g2475 139 PANTHER UNCHARACTERIZED 2 122 IPR044707 GO:0009567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2475 Amo-Chr20 115943134 115943553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2475 - - aip:107621021 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2475 20 115943134 115943553 Amo20g2475 20 115943134 115943553 ECH