Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2373 ATGAATCTTAATTATTGCTTCCATCACAACAAAATTTTCTGTGACATGGAGGACAAAAATAGTTACACTCAGGATGGCACGGTTGATCTTAGAGGAAAACGAGTGCTCTCTTCTACAACTGGGCAATGGAAAGCTTGCAGATATATTCTTGCATACCAAGCATTGGAAAGATTTGCCTACTTTGGAGTAGCTGCTAATTTGGTGAATTATATGACAAGCCAACTCCACAAAGACTTGGTATCTTCAATAAGCGATGTGAATAACTGGTCAGGAGTAGCATGGATAACCCCAATTCTTGGTGCCTACATAGCTGATTCTCATTACATGGGGCGCTTTTGGACGGTCACTCTTTCACTCCTCATATATACCATAGGAGTTGTGCTTCTAGTCCTGACTACTTGGCTGAAAAGCTTGAGACCAAAGTGGAACAGCAATGCAAGCAACTTACAACTATCACTCTTCAATCTATCACTATACACTATAGCAATTGGAAGTGGTGCATTGAAGCCAAACATGTCAACTTTTGGTGCTGATCAATTTGATGATTTCAACTCAAAAGAGAAGCAGCTCAAAGGTTCATTCTTCAATTGGTGGACTTTCCACACATCATGTGGTGCTTTAGTTGCTACTTTGGCTGTTGTCTACATTCAAGAGAAGGTTAGATGGGAATGTGGTTATGCCTTGTGTGCTATTGGATTTCTATTTTCGGTTATTGTTTTCTTTCTGGGCACCCCATTATATAGGCACAAATCTAGAAATGCCAAGACTTGCCATGAAAAGGATTTCATTAGGGTCATTCTTCTTGCCTTCACAAATAGAAACCTTCAGCTTCCTACTTCTCCTTCAGAGCTCCATGAATTTGACTTGCAACATTATGTAAATAGTGGAACGAGGCAAATCCATCACACTCCCCGTTTCAGGTTCTTAGACAAGGCAGCAATAAAAGAGAGCAAAAATGCAGCATGCACAGTGACTCAAGTAGAAGGAACAAAGCTTGTTCTAGGAATGCTTGAAATATGGCTACTAATGCTAATTCCAAGCAATTTCCTTGCAGTAGAGATGACCATTTTTGTCAAACAAGGTACAACATTGGACAGAAGCCTTGGCCAGAGTTTTCGCATTCCGGCCGCCTCCCTCTGGAGCTTCCTAGTTGTCACAATGCTCATTTCCCTCCCAATCTACGACACTTACTTCGTACCGTTCATGCGCCGGAGAACCGGAAACATGAGAGGAATCACGTTGCTACAGAGGCTGGGCGCAGGAATCGCTGTGCAGGCGGTAGCAATGGCTGTGTGCTGCGCCGTAGAGATTCAAAGAATGAATGTGATAGCACAGCAACATATAAGTGGCCATGAAAAGATAGTTCCTATGAGCATATTCTGGTTGTTGCCACAGTATATTTTACTTGGCATAGCAGACACATTTCTTATGAGTGGTTTGTTGGAATTCTTCTATGATCAATCCCCTGAAGAAATGAAGGGTCTTGGAACAACGTTTTTCACAAGCTCTGTTGCTGCTGGGAGCTTTTTTTGCACGTTTTTGGTGACTATGACGGATAACGTTACTGGGAAAGTCAGTGCTTCTGTATTCTTCATTGCTGCGGCTTCCCTCTACAACCCCGACGAGGTGGACGGCATCATGTTTGAGACTCAAATCGGATCTCCGAACCCAGATGTGCCTAATTTGCGTCTCCATGCCCTTGTGTGTCACCGCCGATGCCTGAATTTCTACCGTCCCCTTCTGCGCTCCACCACTGCCTCAGCTACTCGTGCATCTTCCAATTGTGAAGGATAA 1794 0.4342 MNLNYCFHHNKIFCDMEDKNSYTQDGTVDLRGKRVLSSTTGQWKACRYILAYQALERFAYFGVAANLVNYMTSQLHKDLVSSISDVNNWSGVAWITPILGAYIADSHYMGRFWTVTLSLLIYTIGVVLLVLTTWLKSLRPKWNSNASNLQLSLFNLSLYTIAIGSGALKPNMSTFGADQFDDFNSKEKQLKGSFFNWWTFHTSCGALVATLAVVYIQEKVRWECGYALCAIGFLFSVIVFFLGTPLYRHKSRNAKTCHEKDFIRVILLAFTNRNLQLPTSPSELHEFDLQHYVNSGTRQIHHTPRFRFLDKAAIKESKNAACTVTQVEGTKLVLGMLEIWLLMLIPSNFLAVEMTIFVKQGTTLDRSLGQSFRIPAASLWSFLVVTMLISLPIYDTYFVPFMRRRTGNMRGITLLQRLGAGIAVQAVAMAVCCAVEIQRMNVIAQQHISGHEKIVPMSIFWLLPQYILLGIADTFLMSGLLEFFYDQSPEEMKGLGTTFFTSSVAAGSFFCTFLVTMTDNVTGKVSASVFFIAAASLYNPDEVDGIMFETQIGSPNPDVPNLRLHALVCHRRCLNFYRPLLRSTTASATRASSNCEG* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2373 597 Pfam POT family 112 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo20g2373 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 28 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo20g2373 597 SUPERFAMILY MFS general substrate transporter 38 535 IPR036259 -
Amo20g2373 597 Gene3D MFS general substrate transporter like domains 14 542 IPR036259 -
Amo20g2373 597 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 28 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2373 Amo-Chr20 111243530 111247759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2373 16 524 Organic Solute Cotransporters AT2G40460 58.285 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2373 - - gmx:100805054 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2373 20 111243530 111247759 Amo20g2373 20 111243530 111247759 ECH