Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1847 ATGGTGGCAAGCTCAAGTGTGAAGTGTTTCATTTTGGCACCAGTAGTAGCCTTGGGTGAAAAAGAAGAAAAAGAAGAAAAAGAAAAAGAAGCCTTTTTTATTCTTAATGATACTACATTCTTGACAGTATCTGAAATCATGAACAATAAACCATGGCTTTGGAGGAAAAAATCTATGGAGAAGACAATCTTTGCAATGGACAAAGGTGTAAGCCCTCCTGGAACCAATGAAGAAGGGGTAAATAAACAGCCAACAGATATAAAACCTGGATTGGAAAGATCACCGGAAAGTCCAGACAAGAAGTTGGCAACAGTTCTCCTTGATTACCACGCCGGAAACGATCCTTCCATGGAACGCAACCATAGGCCCCAACAAGAAATTAGAGGCATGGAAGGGGCAGAACAAGTCGAATCTGCCAATGATTCAGATAAAGGATCACCTGCTGAAACCGTAACTTCAACCAATGCAACATGCCATGAACCTTTTCAGCAACCAAGTTATATTCAAGAACAAGAGCAGATTCAGAAAGAACTGGAAGAGAAGTTGAGAGAATCAAGTAAAAGGATAGCCGAGTTAACTGCTGAGAATGCTCATCTAGCTAATGCCTTACTAGTCAAAGAAAAATCTATTGAGGACTTGCTTCAATGCAAACAACAAGCAGAAGCAGAGTTTACTACCTTGATGGCAAGGTTAGATGCCACTGAGAAGGAAAATGTTTTCCTCCGATATGAGTTTCACGTGCTGGAAAAGGAACTTGAGATCAGGAAGGAGGAGATCAACTATAGTCGTCAGTATGCAGATGACTCGCATAAACAATATCTTATAAGTGCTGAGAATGTCTCAAAGTTGGAAGCCGAGTGCCAGAGACTCCACACGCTGCTGCATAAAAGCTCACCTGGTCCTGCTAATTTAGTGAATACGAAAAATGAAGCCAGAAAGACGAGGAGGGAGACAGATATGAGAAGAAAAAAGCCTAATCCTACCAGAGATTTGGTTTGCAAGAACAATGATATTAGAAACTCTACCAAAGTATCCGAGAAGAGCATCGGCTTGGTGTTCAAACGGTTACAAGATCTGGATGAGGAAAACAAGGCTCTGAAAAGAATTTTAACCCAGAGAAATACTGAACTAGATTCATCAAGAATCATGTATGCTGAAACAGCTTCCAGATTATCACAGGCTGAGATTTTGCTCAGGAAGTTTTCTGAGAATCAGAAGTCCATGGAGCTAGCAAAGTATTATCCCACATCAAGTGAACTTTCTTTAATATCAAAATTTGATGTTGCTAGTGATGATGGAGCGATCTCTACTGGATCCTGGGCAAATGCTCTTATTTCAGAACTTGAGCATTTGAGAACTGCAGAGGGTGAATGGCATAAGAACATGAGTTTCTTCATGGATGACTTTGTTGAGATGGAGAAACAAGCCATAGTTTCGGTTGATACTCCTAAAAGAGGATACTGCTCTGATACAAGTGGGAGGGAACTGGTGCCAGTTGAACAAGATATTAGCTTCACTGAAGGGGAACAGCAGAATCAATTCAAACATCCATCTGAGAGATCATTTGATTGGCTACAAGTTGTTTTGAATGCAATCTTGGAAGAGAGCCGCTTATCAAAACGAAGCCTTGATGAACTGTTTGATGACATAAAAATTGCTTTTGGTTGCATGAATCACCCAACAACCTGTAAACCTGATAACAGTTTCAGTGGTTCTGGGGAAGCAAAAAGTTCCAAACAATGTGACTCTCATTTGAGAAAGTCAATACATAAAATTATCAAGCTCATTGAAGGAATCGCTCCCGAATCATTCATCTGTAACAACTCTTCAGATTGCTTGGAGGATAACTCGCATTCTAACATATCTCATTCACCAACATCTAAAGAATACTTTGTTCATGTTTTCCAATGGAAGGTTTCAGACTTGAATCCTCTTCTGCATCAACTTGTTCATACCTGCAAAGATTTGCTAACAGGGACAGCAAATTCGGAAAATTTTTTTGAGGAGGTAGCATTTGCTTTGGAGTGGAGCATCAATAACTGTGCCACCTCCACAAATGCTTCAATTGCAAGAGATAAGATCAGGAGGCATTTTGGCTCTCTTCTGTCCAAAATTGATACCGGGAATCAAAGAGATTGTGATGATAAACAGTCTTTTCGCTCCACCTCGGGTGCTTATTCAGATGACCAAGGTGTATGCCTCAACACACAGAAAAATCAGTATGACCCCATTGAAGAAAATAGGAAGTTGAAAGAGGATCTGAGATGCACAATATCTGCAAAGAAGGACGTGGAAGCCAAGCTGACCGAGGCGAATCAGAACTTGACAAAACAGTGTCAAGAAGCACAGAATAGTATCAAAGGTTTAGAATCAGAAATGGCAACATTGAGAGAATCCAAAGGAATAATTGAAGATCAGATTGAAAAACAGAAGATGATAAATGAAGATCTTGACACCCAGCTTACCATAGCACAAGCCAAGTTAAATGATTTCTGTCAAAAGTTCTCATCCTTAGAAGTCGAATTGGAGGATAAAAAGAACTCCTGTGAAGAATTAGAAGCAACTTGTCTTGAGCTTCAGCTCCAGCTGGAAAGCATTGCGAAGAAAGATGCTCCAATATATGGTAGATGTGATGCGGAAAAGATATATCAAACTGGCTGGGAGATCACAACAGCTTCATCAAAGTTGGCGGAGTGCCAAGAAACCATCCTCAACCTTGGGAAACAACTCAAGGCACTTGCTTCGTCTAATGAAACAGCACCTTTTGACAGGGTAGTCTCTGCGACTAGTACTACTATGGCCAATCCTACTCAAAAGAAGAACCTGGTCAAACGATCTTCTCTACGCAACCAAATGCAAGCTGAGGATGATGCTATGGCAGAGATCCATGATCCTGTTCAAGTTGGAGAGAGTGAATGCAGTAAAGATACAGATAAGCCACCCCTTCTTCAATCCGAAGAGGATAGTGCTATGCATGGTCCAGAAGTCATAGCTAATGCTTCACAACCAAGTGTTACATCAGAGCAAAATGATAGAAGCATTGCTGCTATGGGGTCTCTGGCAATTGTACCGAGTAAAAAACAAGGAAGCCTTGGTTTTCTGAAGAAGCTACTACTAAGACAAAAGAAAGGGAAAGTTAAAGGCACTAAGATATTGGTAAAATGA 3165 0.4063 MVASSSVKCFILAPVVALGEKEEKEEKEKEAFFILNDTTFLTVSEIMNNKPWLWRKKSMEKTIFAMDKGVSPPGTNEEGVNKQPTDIKPGLERSPESPDKKLATVLLDYHAGNDPSMERNHRPQQEIRGMEGAEQVESANDSDKGSPAETVTSTNATCHEPFQQPSYIQEQEQIQKELEEKLRESSKRIAELTAENAHLANALLVKEKSIEDLLQCKQQAEAEFTTLMARLDATEKENVFLRYEFHVLEKELEIRKEEINYSRQYADDSHKQYLISAENVSKLEAECQRLHTLLHKSSPGPANLVNTKNEARKTRRETDMRRKKPNPTRDLVCKNNDIRNSTKVSEKSIGLVFKRLQDLDEENKALKRILTQRNTELDSSRIMYAETASRLSQAEILLRKFSENQKSMELAKYYPTSSELSLISKFDVASDDGAISTGSWANALISELEHLRTAEGEWHKNMSFFMDDFVEMEKQAIVSVDTPKRGYCSDTSGRELVPVEQDISFTEGEQQNQFKHPSERSFDWLQVVLNAILEESRLSKRSLDELFDDIKIAFGCMNHPTTCKPDNSFSGSGEAKSSKQCDSHLRKSIHKIIKLIEGIAPESFICNNSSDCLEDNSHSNISHSPTSKEYFVHVFQWKVSDLNPLLHQLVHTCKDLLTGTANSENFFEEVAFALEWSINNCATSTNASIARDKIRRHFGSLLSKIDTGNQRDCDDKQSFRSTSGAYSDDQGVCLNTQKNQYDPIEENRKLKEDLRCTISAKKDVEAKLTEANQNLTKQCQEAQNSIKGLESEMATLRESKGIIEDQIEKQKMINEDLDTQLTIAQAKLNDFCQKFSSLEVELEDKKNSCEELEATCLELQLQLESIAKKDAPIYGRCDAEKIYQTGWEITTASSKLAECQETILNLGKQLKALASSNETAPFDRVVSATSTTMANPTQKKNLVKRSSLRNQMQAEDDAMAEIHDPVQVGESECSKDTDKPPLLQSEEDSAMHGPEVIANASQPSVTSEQNDRSIAAMGSLAIVPSKKQGSLGFLKKLLLRQKKGKVKGTKILVK* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1847 1054 Pfam Filament-like plant protein, long coiled-coil 169 918 IPR008587 -
Amo20g1847 1054 Coils Coil 168 202 - -
Amo20g1847 1054 Coils Coil 761 806 - -
Amo20g1847 1054 MobiDBLite consensus disorder prediction 309 330 - -
Amo20g1847 1054 SUPERFAMILY Tropomyosin 737 875 - -
Amo20g1847 1054 MobiDBLite consensus disorder prediction 968 985 - -
Amo20g1847 1054 MobiDBLite consensus disorder prediction 132 166 - -
Amo20g1847 1054 PANTHER FILAMENT-LIKE PROTEIN (DUF869) 47 1048 - -
Amo20g1847 1054 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 47 1048 - -
Amo20g1847 1054 MobiDBLite consensus disorder prediction 968 992 - -
Amo20g1847 1054 MobiDBLite consensus disorder prediction 296 337 - -
Amo20g1847 1054 Coils Coil 835 869 - -
Amo20g1847 1054 MobiDBLite consensus disorder prediction 67 99 - -
Amo20g1847 1054 MobiDBLite consensus disorder prediction 139 166 - -
Amo20g1847 1054 Coils Coil 217 237 - -
Amo20g1847 1054 Coils Coil 356 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1847 Amo-Chr20 63475997 63481015 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1847 - - gmx:100775416 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1847 20 63475997 63481015 Amo20g1847 20 63475997 63481015 ECH