Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1721 ATGAGCTCCACTTCATTCACTTCAGTTAGCTTCAACACCGCTTCCTCTTGGAACTTGAAGAGACGTGAAGGAGGGAAAGCATATGTCAGGTGTGGGAGCGCTGCTTCTTCCGAAAACACTGTTCGTGTTGGTGTTCTTGGAGCTAGTGGCTACACTGGTTCTGAGGTTCTTAGGCTTTTGGCGAATCATCCGCAATTCGGGGTTGCTCTATTGACTGCCGATAGGAAAGCTGGACAGCCGATTGCTTCCGTCTTCCCCCATTTGGCCACACAGAAATTGCCAGATTTGATTGCGGTCAAGGATGCAGATTTTTCTCATGTGGATGCTGTATTCTGTTGTTTGCCGCATGGAACCACTCAGGAAATAATTAGAGGCCTTCCCAATCACTTGAAGATTGTTGACCTTTCAGCAGATTTTCGTTTACGTGATATATCTGAGTATGAAGAGTGGTATGGCCAACCACACAGGGCACCGGAGTTGCAGAAAGAAGCTATATATGGATTAACAGAGATTTTAAGGGAGGAAATAAGGAATGCACGCTTAGTTGCTAATCCTGGTTGCTATCCAACATCCATTCAAATTCCCCTTGTCCCACTGATAAAGGCAAAGCTTATTGACATAAAAAATATTATTATTGATGCAAAATCTGGTGTGAGTGGAGCAGGGCGTAGTGTCAAAGAAAATTTATTGTACACAGAAGTAGCTGAAGGTATCAATTCTTATGGTGTTACCCGGCATCGCCATGTTCCAGAAACTGAACAAGGGCTATCTGATGCTGCACATTCTAAAGTAACCATCAGTTTTACCCCGCATCTGATGCCAATGATACGTGGTATGCAATCAACTATTTATGTGGAAATGGCTCCAGGAGTAAGCACTGAGGACTTGTACCAGCAACTCAAGCGCTCTTATGAAAATGAAGAATTTGCCATACTGTTGGGGAATGGAGTAGTTCCCCAAACTCACAGCGTCAGAGGAACCAATTACTGTTTAATAAATGTTTTTCCTGACCGAATTCCCGGAAGAGCAATAATCATATCTGTGATTGATAATTTGGTGAAAGGAGCTTCAGGACAGGCTTTACAAAACCTTAATTTGATGATGGGTTTCCAGAAAACCTAG 1122 0.4323 MSSTSFTSVSFNTASSWNLKRREGGKAYVRCGSAASSENTVRVGVLGASGYTGSEVLRLLANHPQFGVALLTADRKAGQPIASVFPHLATQKLPDLIAVKDADFSHVDAVFCCLPHGTTQEIIRGLPNHLKIVDLSADFRLRDISEYEEWYGQPHRAPELQKEAIYGLTEILREEIRNARLVANPGCYPTSIQIPLVPLIKAKLIDIKNIIIDAKSGVSGAGRSVKENLLYTEVAEGINSYGVTRHRHVPETEQGLSDAAHSKVTISFTPHLMPMIRGMQSTIYVEMAPGVSTEDLYQQLKRSYENEEFAILLGNGVVPQTHSVRGTNYCLINVFPDRIPGRAIIISVIDNLVKGASGQALQNLNLMMGFQKT* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1721 373 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED 2 372 - -
Amo20g1721 373 Pfam Semialdehyde dehydrogenase, NAD binding domain 42 179 IPR000534 GO:0016620|GO:0051287
Amo20g1721 373 Gene3D - 42 369 - -
Amo20g1721 373 Pfam Semialdehyde dehydrogenase, dimerisation domain 196 354 IPR012280 GO:0008652|GO:0016620|GO:0046983
Amo20g1721 373 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 187 351 - -
Amo20g1721 373 SMART Semialdhyde_dh_3 42 179 IPR000534 GO:0016620|GO:0051287
Amo20g1721 373 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 41 373 IPR000706 GO:0003942|GO:0006526
Amo20g1721 373 ProSitePatterns N-acetyl-gamma-glutamyl-phosphate reductase active site. 182 198 IPR023013 GO:0003942
Amo20g1721 373 Gene3D Dihydrodipicolinate Reductase; domain 2 185 351 - -
Amo20g1721 373 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 2 372 - -
Amo20g1721 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 212 IPR036291 -
Amo20g1721 373 TIGRFAM argC: N-acetyl-gamma-glutamyl-phosphate reductase 41 372 IPR000706 GO:0003942|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1721 Amo-Chr20 49571796 49575338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1721 K00145 - gmx:100801527 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1721 20 49571796 49575338 Amo20g1721 20 49571796 49575338 ECH