Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1695 ATGGTAGAGGTAGACCCAATTTTTGTGCAAGCAGCAGAACACAGACCAAAAGCTTCAATAACCACAGCCGAAGGAATCCCTTTAATTGATCTGTCTCCCATAAACTACCAAGATGATGAAGAAGCCACAAGATTGCCATCACCATCACCAGTTTCGAATATTATTGAAGAAATAGGGAGAGCATGCAAAGAATGGGGTTTCTTTCAGGTGATCAATCACAAGGTGCCTTTAGAGAAGAGGCAGAGGATTGAAGATGCTGCGAAGAAGTTCTTTGGTCTTAGTTTGGAGGAGAAGCTGAAGGTTAGAAGGGATGATAGGAACGTGCTTGGTTACTTTGAAGCAGAGCATACCAAGAACGTTAGGGATTGGAAGGAGATTTATGATTTCAATGTTCAACAACCTACTTTCATTCCACCATCTCATGATCATCACCATGATGACATAAATATTCAGTTTCATTGGGATAATCGTTGGCCTCTCAATCCTCCTCACTTTAGAGAAGCATGCGAAGACTATGCAGAAGAAGTGGAGAAACTAGCCTATAAGCTGATGGAACTGATTGCACTGAGCTTAGGGTTAGCACCAAATAGGTTCCGTGGCTTCTTCAAACACAACACAAGTAATATCAGACTGAATCATTATCCACCTTGCCCTTACCCTCATTTGGCACTTGGTCTTGGGCGCCACAAAGACACTGGAGTGTTAACTGTGCTTAATCAAGATGATGTTGGTGGTCTTCAAGTTAGACGAAAATCTGATGGAGAGTGGATCACAGTCAAACCCATTTCCAATTCTTTCATCATCAATGTTGGTGACATGATTCAGGTTTGGAGCAATGATGCATATGAAAGCGTAGAGCACAGGGTGATGGTAAACTCAGAGAGAGACAGGTTTTCCATTCCATTCTTCTTGAAGCCAGCATTGTACACTGATGTGGAACCTCTACAAGAGTTGATAAACGACAAGAACCCTCCAAAGTATAAAGCAATCAACTGGGGCAAGTTCCGCATTGCAAGAATGAGAAGTAATTTTACTAAGTCCAGTGTTGAAAATCTCCAAATTTATCACTTCAAGTTGTCCCAATAA 1086 0.4162 MVEVDPIFVQAAEHRPKASITTAEGIPLIDLSPINYQDDEEATRLPSPSPVSNIIEEIGRACKEWGFFQVINHKVPLEKRQRIEDAAKKFFGLSLEEKLKVRRDDRNVLGYFEAEHTKNVRDWKEIYDFNVQQPTFIPPSHDHHHDDINIQFHWDNRWPLNPPHFREACEDYAEEVEKLAYKLMELIALSLGLAPNRFRGFFKHNTSNIRLNHYPPCPYPHLALGLGRHKDTGVLTVLNQDDVGGLQVRRKSDGEWITVKPISNSFIINVGDMIQVWSNDAYESVEHRVMVNSERDRFSIPFFLKPALYTDVEPLQELINDKNPPKYKAINWGKFRIARMRSNFTKSSVENLQIYHFKLSQ* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1695 361 Gene3D - 1 346 IPR027443 -
Amo20g1695 361 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 351 - -
Amo20g1695 361 Pfam 2OG-Fe(II) oxygenase superfamily 207 306 IPR044861 -
Amo20g1695 361 SUPERFAMILY Clavaminate synthase-like 5 344 - -
Amo20g1695 361 PANTHER GIBBERELLIN-44 DIOXYGENASE-RELATED 2 351 - -
Amo20g1695 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 306 IPR005123 -
Amo20g1695 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 159 IPR026992 -
Amo20g1695 361 PRINTS Isopenicillin N synthase signature 58 75 - -
Amo20g1695 361 PRINTS Isopenicillin N synthase signature 229 250 - -
Amo20g1695 361 PRINTS Isopenicillin N synthase signature 294 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1695 Amo-Chr20 48495624 48498584 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1695 17 354 Glycosyltransferase AT5G59530 30.925 2.88e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1695 - - gmx:100808372 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1695 20 48495624 48498584 Amo20g1695 20 48495624 48498584 ECH