Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1691 ATGAATGAATCATCATCATCGTCATCACAAGCCATGGGGACAATTGACGTTGACCAAGCATTCATCCAAGAACCAGAACACAGGCCAAGTCTCTCCACCATTGAAGGACAAGGGATTCCAGTCATAAACCTCTCCCCTGTAACATCAAACAACCCTTCTCTTTCTTCCATCGACGCGCTGGTGAAGGAGATCGGAAGCGCGTGCAAGGAATGGGGATTCTTCCAAGTAACAAACCATGGTGTGCCTCTCTCTCTGAGGCGGAACCTTCTGGAAGCTTCCAAGAGCTTCTTTGCTCAGAGCTTGCAAGATAAGAAGAAAGTTAGCAGAGATGAAACGTCTGCCAGCGGTTACTATGACACTGAGCACACAAAGAACGTTAGGGATTGGAAGGAAGTCTTTGATTTTCTAGCCAAAGAACCGACTCTTTTTCCCCTCACTTCTGATGAACACGATGATCGAATCCTTCATTGGACTAATAAAAATCCTCAATACCCTCCACACTTCAGAGATATACTAAAGGAGTATATCAAGGAGATGGAAAAGCTGAGCTACAAATTGTTGGAGCTGATTGCTCTGAGCTTGGGACTTGAATCTAAGAGGTTCGAAGAATTCTTTGGAGACCAAACAAGTTTTGTTCGATTGAAATATTACCCTCCATGCCCTTACTCTCACCTAGCTCTTGGGGTGGGTCCACACAAGGACTCTGGTGCCTTAACCATTCTTGCCCAAGACGATGTTGGAGGTCTTCAAGTCAAACGCAAGACGCACGACCAAGAATGGATCAACGTTGAACCAATCCCACATGCTTATATCATCAATCTCGCTGATATTATTCAGGTTTGGAGCAATGGTGCATATGAGAGTGTGGAACACAGAGTAATAGTTAACTCGGAGAAGGAAAGGTTTTCCATTCCATACTTCTTGTTCCCTGCACATGACATTGAAGTGAAGCCATTGAAGGAGCTGATACATGAACACAACCCTCCAAAATATCGGCCTTACAAGTCAGGGAAGTTTCTTCTCAAAAGATTTGAAGGCAATTTCCAGAAACATAGAGAGGAGAACCTTCAAATTCATCACTTTAAGATAGCCTAA 1095 0.4393 MNESSSSSSQAMGTIDVDQAFIQEPEHRPSLSTIEGQGIPVINLSPVTSNNPSLSSIDALVKEIGSACKEWGFFQVTNHGVPLSLRRNLLEASKSFFAQSLQDKKKVSRDETSASGYYDTEHTKNVRDWKEVFDFLAKEPTLFPLTSDEHDDRILHWTNKNPQYPPHFRDILKEYIKEMEKLSYKLLELIALSLGLESKRFEEFFGDQTSFVRLKYYPPCPYSHLALGVGPHKDSGALTILAQDDVGGLQVKRKTHDQEWINVEPIPHAYIINLADIIQVWSNGAYESVEHRVIVNSEKERFSIPYFLFPAHDIEVKPLKELIHEHNPPKYRPYKSGKFLLKRFEGNFQKHREENLQIHHFKIA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1691 364 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 15 355 - -
Amo20g1691 364 Gene3D - 8 351 IPR027443 -
Amo20g1691 364 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 15 355 - -
Amo20g1691 364 PRINTS Isopenicillin N synthase signature 298 316 - -
Amo20g1691 364 PRINTS Isopenicillin N synthase signature 232 253 - -
Amo20g1691 364 PRINTS Isopenicillin N synthase signature 64 81 - -
Amo20g1691 364 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 310 IPR005123 -
Amo20g1691 364 Pfam 2OG-Fe(II) oxygenase superfamily 210 310 IPR044861 -
Amo20g1691 364 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 162 IPR026992 -
Amo20g1691 364 SUPERFAMILY Clavaminate synthase-like 16 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1691 Amo-Chr20 48262625 48267128 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1691 25 363 Glycosyltransferase AT5G59530 32.370 4.64e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1691 - - ahf:112718217 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1691 20 48262625 48267128 Amo20g1691 20 48262625 48267128 ECH