Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1689 ATGGAAGAGGAGGACCAAGCATTATTTATCCAAGAACCACAACACAGGCCAAGTGTCTCCACCATGGAAGCACAAGGAATTCCAGTCATAGACCTCTCCCCTGTAACATCAAGCAATCCTTCTCTTTCTTCCATTGACGCGCTGGTGAAGGAGATCGGAAGCGCGTGCAAGGAATGGGGATTCTTCCAAGTAACAAACCACGGTGTGCCTCTCTCTCTGAGGCGGAACCTTCTGGAAGCATCCAAGAACTTCTTTTCTCAGAGCTTGCAGGAAAAGAAGAAGGTTAGCAGAGATGAAAGTTCTCCGAGCGGTTACTATGACACTGAGCTCACAAGGAACGTTAGAGATTGGAAAGAAGTGTTTGATTTTCTTGCAAAAGAACCAACTTTCTTCCCTCTTACTGCAGATGAACTTGATGATCGAGTCACGCAGTTGAGTAATAAATCTCCTCAACATCCTTCTCACTTCAGAGATATAATCCAAGAGTATATTGAAGAGATGGAGAAGCTAGCCTTCAAATTGATGGAACTTATAGCTATGAGTTTAGGCCTTCAACCAAAGAGGCTTGAGGAATTCTTTATGAGAGGTCAAACCAGTCTTATTCGTCTCAACTATTATCCTCCATGCCCCTTCCCTCACATAGCTCTTGGAGTTGGTCCACACAAGGATGAAAGTGCCTTAACCATTCTTGCTCAAGATGAGGTTGAAGGACTTGAAGTGAAACATAAGACACATCAAGAGTGGGTTAGAGTGAAACCAACCCCAAATGATTATATCATCAACGTTGGTGATATTATTCAGGTACAACTTCTGCAGAATTTTAACTTTGGAATGTGA 837 0.4301 MEEEDQALFIQEPQHRPSVSTMEAQGIPVIDLSPVTSSNPSLSSIDALVKEIGSACKEWGFFQVTNHGVPLSLRRNLLEASKNFFSQSLQEKKKVSRDESSPSGYYDTELTRNVRDWKEVFDFLAKEPTFFPLTADELDDRVTQLSNKSPQHPSHFRDIIQEYIEEMEKLAFKLMELIAMSLGLQPKRLEEFFMRGQTSLIRLNYYPPCPFPHIALGVGPHKDESALTILAQDEVEGLEVKHKTHQEWVRVKPTPNDYIINVGDIIQVQLLQNFNFGM* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1689 278 Pfam 2OG-Fe(II) oxygenase superfamily 199 268 IPR044861 -
Amo20g1689 278 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 4 268 - -
Amo20g1689 278 Pfam non-haem dioxygenase in morphine synthesis N-terminal 27 134 IPR026992 -
Amo20g1689 278 Gene3D - 2 271 IPR027443 -
Amo20g1689 278 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 4 268 - -
Amo20g1689 278 SUPERFAMILY Clavaminate synthase-like 9 268 - -
Amo20g1689 278 PRINTS Isopenicillin N synthase signature 52 69 - -
Amo20g1689 278 PRINTS Isopenicillin N synthase signature 221 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1689 Amo-Chr20 48230694 48232526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1689 13 268 Glycosyltransferase AT5G59530 32.950 2.59e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1689 - - ahf:112718217 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1689 20 48230694 48232526 Amo20g1689 20 48230694 48232526 ECH