Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1677 ATGGAAGAGGTTGATCATCAAGAATTCGTTCAAGAACCACAACACAGGCCAAGTCTCTCCACCATTGAAGCACAAGGAATTCCAGTCATAGACCTCTCCCCTATAACATCAAACAACACTTCCCCTTCGGCCATCGACGCGCTGACGAAGGAGATCGGAAGCGCGTGCAAGGAATGGGGATTCTTCCAAGTAACAAACCACGGTGTGCCTCTCTCTCTGAAGCGGAACCTTCTGGAAGCTTCAAAGAAGTTCTTTTCTCAGAGCTTGGAAGATAAGAAGAAAGTTAGTAGAGATGAGAGTTCTCCGAGCGGTTACTATGAGAGTGAGTATACAAAGGATGTTAGAGACTGGAAAGAAGTGTTTGATTTCTTTGCCAAAGAACCTACTTTGTTCCCTGCCACTATTGATGAACATAATCATCGAGTTGTTCAATGGACTAATAAATATCCTCACTATCCCCCTGCCTTCAGAGATATAATCCAAGAATATATTGAAGAGATGGAGAAGCTAGCCTACAAGTTGATGGAGCTTATAGCTATGAGCTTAGGCCTTGAAGCTAAGAGATTTGAGAGATTTTTCATTAGAGGACAAACCAGCTTTATTCGCCTTAATTATTATCCTCCATGCTCTTTCCCTCACCTTGCTCTTGGAGTTGGCCCACACAAGGATGAAAGTGCTTTAACCATTCTTGCTCAAGATGAGGTTGAAGGACTTGAAGTGAAACGTAAGACAAACCAAGAGTGGATTAGAGTGAAACCAAAGTCAAATGATTATATCATCAACCTTGGTGACATTATTCAGGTGTGGAGCAATGATAGATATGAGAGTGTGGAACACAGAGCAATGGTTAACTGTGAGAGTGAAAGGTTTTCAATTCCATATTTCTTTTTCCCTGCACATGACACCGAAGTGAAGCCATTGGAGGAGCTGATAAATGACCAAAACCCTCCAAAATATAGGCCATATAAATCCGGCAAATTTCTTCTATACCGAATGATCAACGATTTCAAGAAACAAAATAAGGACAACCTTCAAATTCATGATTATAAACTAGCTTAA 1059 0.4108 MEEVDHQEFVQEPQHRPSLSTIEAQGIPVIDLSPITSNNTSPSAIDALTKEIGSACKEWGFFQVTNHGVPLSLKRNLLEASKKFFSQSLEDKKKVSRDESSPSGYYESEYTKDVRDWKEVFDFFAKEPTLFPATIDEHNHRVVQWTNKYPHYPPAFRDIIQEYIEEMEKLAYKLMELIAMSLGLEAKRFERFFIRGQTSFIRLNYYPPCSFPHLALGVGPHKDESALTILAQDEVEGLEVKRKTNQEWIRVKPKSNDYIINLGDIIQVWSNDRYESVEHRAMVNCESERFSIPYFFFPAHDTEVKPLEELINDQNPPKYRPYKSGKFLLYRMINDFKKQNKDNLQIHDYKLA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1677 352 Pfam 2OG-Fe(II) oxygenase superfamily 199 298 IPR044861 -
Amo20g1677 352 PRINTS Isopenicillin N synthase signature 52 69 - -
Amo20g1677 352 PRINTS Isopenicillin N synthase signature 221 242 - -
Amo20g1677 352 PRINTS Isopenicillin N synthase signature 286 304 - -
Amo20g1677 352 Coils Coil 160 180 - -
Amo20g1677 352 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 3 343 - -
Amo20g1677 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 27 145 IPR026992 -
Amo20g1677 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 298 IPR005123 -
Amo20g1677 352 Gene3D - 1 339 IPR027443 -
Amo20g1677 352 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 3 343 - -
Amo20g1677 352 SUPERFAMILY Clavaminate synthase-like 8 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1677 Amo-Chr20 47732954 47737133 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1677 13 320 Glycosyltransferase AT5G59530 30.745 1.64e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1677 - - gmx:100101864 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1677 20 47732954 47737133 Amo20g1677 20 47732954 47737133 ECH