Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1620 ATGCCTAACGTGGGAAGGAACGATAGTGAACATGAAAATCACAAGGATGGTAAAGGCAACGTTAAAGCACCGGAAACCGCGCACCAGATTAGTAGCGATTCATGGTTTCAAGTGGCTTTTGTCCTAACCACCGGAATCAACAGCGCTTATGTGCTGGGATATTCCGGCACCATCATGGTGCCGCTTGGTTGGGTTGGTGGCGTGGTTGGTCTAATCCTGGCCACCATGATTTCGCTCTATGCAAATGCTCTTGTTGCTATGCTCCATGAGTATGGGGGGAGAAGGCACATCAGATGTAGAGATCTTGCTGGATTCATATACGGAAGATGGGCGTATACTCTTACATGGGCTCTACAATACGTCAATCTTTTCATGATCAATACTGGCTATATCATTTTGGCCGGTTCAGCCTTGAAAGCTACTTATCTTCTATTTTGGGATGATCACACAATGAAACTTCCATATTTTATTGCCATAGCTGGCTTTGTGTGTGCAATGTTTGCTTTTGGAATCCCTTCTCTTTCAGCTCTTGGAGTTTGGCTGGGTTTTTCAACTCTCTTGAGTCTAGCTTATATTGTTATAGCATTTGTGCTGTCCCTTAAAGATGGATTGAATGCACCACCTAGAGATTTCAGTATTCCGGGCAATGGCGCCGGTAAAATATTTTCGATCATCGGAGCGAGCGCTAATCTCGTGTTCGCATATAACACTGGCATGCTTCCCGAAATACAGGCAACAATTAAGCAGCCAGTTGTGACGAACATGATGAAAGCCCTGTATTTTCAGTTCACAGTTGGTGTTCTTCCATTGTACCTGGTTACATTTACAGGTTACTGGGCTTATGGAAATTCCACATCAGCATATTTGCTGAACAATGTGAATGGTCCTGTCTGGGTTAAAGCTGTAGCTAACATTACAGCTTTTCTTCAATCAGTCATTGCATTGCATATATTTGCTAGTCCTATGTATGAGTATGCGGACACCAAATATGGGATCACCGGAAGTGCCCTACAAATTAAGAACTTAACATTCAGGATTTTACTAAGAGGTGGCTACCTCACCTTCAATACATTTGTATCTGCTCTGCTACCATTTCTTGGAGATTTCATGAGCCTCACAGGTGCAATAAGCACATTCCCACTCACATTTATTCTTGCAAACCATATGTACCTAACGGCAAAGAAGGACAAACAATCATCCATGCAACAGCTTTGGCACTGGCTCAACATTGTTTTCTTTAGCATCATGTCTCTTGTAGCAACAGTTTCAGCCGTACGGCTTATCTCCGTAGACTCCAAAACATACCATCTTTTTGCTGATTTATGA 1326 0.4291 MPNVGRNDSEHENHKDGKGNVKAPETAHQISSDSWFQVAFVLTTGINSAYVLGYSGTIMVPLGWVGGVVGLILATMISLYANALVAMLHEYGGRRHIRCRDLAGFIYGRWAYTLTWALQYVNLFMINTGYIILAGSALKATYLLFWDDHTMKLPYFIAIAGFVCAMFAFGIPSLSALGVWLGFSTLLSLAYIVIAFVLSLKDGLNAPPRDFSIPGNGAGKIFSIIGASANLVFAYNTGMLPEIQATIKQPVVTNMMKALYFQFTVGVLPLYLVTFTGYWAYGNSTSAYLLNNVNGPVWVKAVANITAFLQSVIALHIFASPMYEYADTKYGITGSALQIKNLTFRILLRGGYLTFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLTAKKDKQSSMQQLWHWLNIVFFSIMSLVATVSAVRLISVDSKTYHLFADL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1620 441 MobiDBLite consensus disorder prediction 7 22 - -
Amo20g1620 441 PANTHER OS05G0424000 PROTEIN-RELATED 14 436 - -
Amo20g1620 441 PANTHER PROLINE TRANSPORTER 1 14 436 - -
Amo20g1620 441 Pfam Transmembrane amino acid transporter protein 33 424 IPR013057 -
Amo20g1620 441 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1620 Amo-Chr20 45145245 45148462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1620 59 441 Organic Solute Cotransporters AT2G39890 74.413 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1620 - - gmx:100778997 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1620 20 45145245 45148462 Amo20g1620 20 45145245 45148462 ECH