LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo20g1617	ATGTCGAATTCACATTCAACTCTCCGGGAGCTTCTCAAKCGGTTATCGAACGAAATCGCGGAGTGCCTCGCCGGAACTCCTTACACTGCTCCTGAGAGCTCCTCCGTCTCCGTCAAAGCATTCCTCCAACCACTCCTTCTTCCGCCGCCGTCCGATGCTTCCAACACCACCACCGCCCTAAGCGATTCCATCAAGGACTTCGCCCTCGCCTGCACGCTCTTATCCTCCGCTTCAACCTTCAAGCCCTTCACCTCCGACCAATCCACGCTCCTATCCTGGATCCCCACGCACCTCTCCTCACTCGCCGCGGCCTCCTTCCTTGAATTCTCCCAACAATACGCTGCCGCCGCAGCGGATGAGGGTGGGATCTTCGATAACGTTGCCGAGTTCGGGCTGAGTTGTGACTCGCTCCCGAAAGAGAAGAGGTTGGTGGTGGAGCTGGTGCCTGAGGTGTTGCCGCTTCTCAAGGAGAGGATAAAGGAGAGCTCCATTGATAAGAGTGATGATAATGATGAGTTCTCCGCTGCTTCAGCTAGGGTGCCGGTTGGGTTTGCCGTTCTGGCTGCTTTTCAGTTACGATGGTTTGTCACTCAGGTTGATTATCCTCTTTTGGGCAAGTTTTATGGATTGGTGATTCCTTGTTCGCTGACTGCCATTGATCATTGGTCGCCAGAGGTGAAGGGGCAGGGGATGGTTTGTTTTGCGCATCTTGGAAAAAATGTTGCTGCTGCTGAGATTGGTTCATATGCGGATGTGATTCTTGATGCTTGTTGCCAGAATATTGCTTCTACTGATGAGATATGGCAGCAGGTGGTTGAGACATCAGTAGTTATTTCAACTCTGACTCAGAGAAGTAATCCGCGTAGCCCCTGGTTTGAAAAGATGCTAAATGAGATGTTAAGTCACTTGGAGCGCCAGCCCAAAAACAAAGAACGCCGCATTGCATGGCTTAAATTTTCCGATTCAATATTTAATGCAGTTGGTCTTGTGTTATTAGCTCACTTCAGGCGCATTTTCCCTTTATTTTTTCAGTGGATGCATGTCGATGACGATGAGACTCTTATTTTGCATTTCGCAGCAGCTTGGGAGAAGCATCGATCTGATCCAAACTTGGCCAAGCTTGATCTTCCATTAAGTGGAAGAGACAGCATTACTCCGCCTCCACAGCATTGCCATCAGCAGGGATCTACACCCCCTTCAAACATGATTAGATAG	1215	0.4988	MSNSHSTLRELLXRLSNEIAECLAGTPYTAPESSSVSVKAFLQPLLLPPPSDASNTTTALSDSIKDFALACTLLSSASTFKPFTSDQSTLLSWIPTHLSSLAAASFLEFSQQYAAAAADEGGIFDNVAEFGLSCDSLPKEKRLVVELVPEVLPLLKERIKESSIDKSDDNDEFSAASARVPVGFAVLAAFQLRWFVTQVDYPLLGKFYGLVIPCSLTAIDHWSPEVKGQGMVCFAHLGKNVAAAEIGSYADVILDACCQNIASTDEIWQQVVETSVVISTLTQRSNPRSPWFEKMLNEMLSHLERQPKNKERRIAWLKFSDSIFNAVGLVLLAHFRRIFPLFFQWMHVDDDETLILHFAAAWEKHRSDPNLAKLDLPLSGRDSITPPPQHCHQQGSTPPSNMIR*	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo20g1617	404	SUPERFAMILY	ARM repeat	141	350	IPR016024	-
	Amo20g1617	404	MobiDBLite	consensus disorder prediction	386	404	-	-
	Amo20g1617	404	PANTHER	OS06G0694100 PROTEIN	56	357	-	-
	Amo20g1617	404	MobiDBLite	consensus disorder prediction	376	404	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo20g1617	Amo-Chr20	44715757	44719457	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo20g1617	K23115		-	gmx:100814295	426.787

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo20g1617	20	44715757	44719457	Amo20g1617	20	44715757	44719457	ECH
	Amo20g1617	20	44715757	44719457	Amo10g1126	10	23695417	23699508	hybridization