Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1526 ATGGTTGGACCTTCAAGGCCTCAATTTGTTCTCTTTGGATCCTCCATTGTTCAGCTTAGTTACAGCCATGGCGGTTGGGGTACCATTCTCTCCGACATCTACTCTCGCAAGGCAGACATAGTGCTTAGGGGATACTATGGATGGAACTCACGACGTGCCCTTCAAGTCCTCCATAAAGTTTTCCCAAAGGATGCTGCTGCACAACCTACTCTTGTAATAGTTTATTTTGGAGGTAATGATTCCATGGGTCCTCACTCATCTGGCCTTGGCCCTCATGTGCCTCTTCCTGAATATATTGAGAACATGAGGAAGATTCTGGTTCATCTTCAGAGCCTCTCTGAAACGATGCGTATCCTTGTTCTTAGCTGTCCACCTGTCAATGAAGAAAAAGTAAAAGGAAATACTAGTGGAATATTTAGCGAGCTGGTAAGAACAAATGAATTGTGCCAAAGCTATTCAGAAGCATGCATAAAGCTATGCAAGGAACTGGATGTGAAAGTCATTGATCTTTTCAATGCACTACAGAAGAGAGACGATTGGATGAATGCTTGTTTTACTGATGGTATACATTTGGCATCTGAGGGAAGCAAAATTGTGGTGAAGGAGATACTGAAAGTGCTCAAGGAGGCTGATTGGGAGCCATGCCTTCATTGGAAGTCCATGCCAACTGAATTTGCAGAAGATTCACCATATGATCTTGTTGCTGCTGATGGCAAAACTACACTGAATCCTTCTGAGTGGACTTTCTATAGGGAAGTTCAGTGGGACTAG 771 0.4358 MVGPSRPQFVLFGSSIVQLSYSHGGWGTILSDIYSRKADIVLRGYYGWNSRRALQVLHKVFPKDAAAQPTLVIVYFGGNDSMGPHSSGLGPHVPLPEYIENMRKILVHLQSLSETMRILVLSCPPVNEEKVKGNTSGIFSELVRTNELCQSYSEACIKLCKELDVKVIDLFNALQKRDDWMNACFTDGIHLASEGSKIVVKEILKVLKEADWEPCLHWKSMPTEFAEDSPYDLVAADGKTTLNPSEWTFYREVQWD* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1526 256 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 253 IPR045136 -
Amo20g1526 256 Pfam GDSL-like Lipase/Acylhydrolase family 11 197 IPR013830 -
Amo20g1526 256 SUPERFAMILY SGNH hydrolase 5 210 - -
Amo20g1526 256 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
Amo20g1526 256 PANTHER GDSL ESTERASE/LIPASE CPRD49-LIKE 1 253 - -
Amo20g1526 256 Gene3D SGNH hydrolase 5 235 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1526 Amo-Chr20 37199536 37203850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1526 K23978 - gmx:100499873 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1526 20 37199536 37203850 Amo20g1526 20 37199536 37203850 ECH
Amo20g1526 20 37199536 37203850 Amo10g1056 10 20834795 20839043 hybridization