Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1481 ATGTCCAACACTTCACCAGATTGGCCTGAACCAATAGTGAGAGTTCAATCCTTGTCGGAAAGATGCATAGATTCAATCCCAGACAGGTATATCAAGCCCCCGACCCATAGGCCGGTTTCTGCTTCTACTTCTACTTCTACTTCGGATGCAAATATCCCGGTCATAGACTTCGGAGACTTTCTAGGCACCGACCCGGATGCGAGGAAGTCGGTGCTCCAGAAAGTTGCCGAGGCCTGCAATGACTGGGGGTTCTTCCAAGTGGTGAACCACGGGGTTAGACCAGAGTTGATGGACAAGGCTAGGGAAACTTGGCGTGAATTCTTTCACCTTCCCATGGAATTGAAGCAAAAATATGCAAACTCTCCAAAGACTTATGAAGGTTATGGAAGTAGGCTTGGTGTTGAAAAGGGTGCTATTCTTGATTGGAGTGATTACTATTTCCTTCACTACCTTCCTTTGTCACTCAAAGATTATAACAAATGGCCTTCTTTGCCTCTCTCTTGCAGGGAAGTGTTTGATGAATATGGGAGAGAGGTGGTGAAGCTAGGAGGGAGGTTGTTGAAGGCTTTGTCTATAAACTTAGGTTTAGAAGAGGATTTTCTCCAGAATGCATTTGGGGGTGAAGATATTGGGGCATGTTTGAGGGTTAATTTTTACCCAAAGTGCCCTCGGCCGGAGCTGACGCTTGGTCTGTCGTCGCACTCGGACCCCGGAGGGATGACGATGTTGCTGCCGGACGACCAAGTTGCCGGCCTTCAGGTTCGGAGAGGCGACGAATGGATCACGGTGAAGCCTGCTCGCCATGCCTTCATTGTTAATATTGGAGATCAAATTCAGGTTATAAGCAATGCAAAATACAAGAGCGTGGAGCACAGAGTAATAGTAAATTCAGATAAAGAGAGAGTATCATTGGCATTTTTCTACAACCCAAAAAGTGACATACCCATTCAGCCAGCAAAGGAATTGGTAACCCCAGACACCCCTTCACTCTACCCTCCCATGACCTTTGATGAATATAGGCTCTTCATTAGAACCAGAGGTCCACGTGGCAAATCCCAAGTGGACTCTCTAAAATCTCCTAGATAA 1086 0.4669 MSNTSPDWPEPIVRVQSLSERCIDSIPDRYIKPPTHRPVSASTSTSTSDANIPVIDFGDFLGTDPDARKSVLQKVAEACNDWGFFQVVNHGVRPELMDKARETWREFFHLPMELKQKYANSPKTYEGYGSRLGVEKGAILDWSDYYFLHYLPLSLKDYNKWPSLPLSCREVFDEYGREVVKLGGRLLKALSINLGLEEDFLQNAFGGEDIGACLRVNFYPKCPRPELTLGLSSHSDPGGMTMLLPDDQVAGLQVRRGDEWITVKPARHAFIVNIGDQIQVISNAKYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIQPAKELVTPDTPSLYPPMTFDEYRLFIRTRGPRGKSQVDSLKSPR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1481 361 SUPERFAMILY Clavaminate synthase-like 12 346 - -
Amo20g1481 361 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 358 - -
Amo20g1481 361 PRINTS Isopenicillin N synthase signature 75 92 - -
Amo20g1481 361 PRINTS Isopenicillin N synthase signature 270 296 - -
Amo20g1481 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 163 IPR026992 -
Amo20g1481 361 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 358 - -
Amo20g1481 361 Pfam 2OG-Fe(II) oxygenase superfamily 212 310 IPR044861 -
Amo20g1481 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 310 IPR005123 -
Amo20g1481 361 Gene3D - 10 344 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1481 Amo-Chr20 34440335 34443429 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1481 15 358 Glycosyltransferase AT5G59530 33.146 5.36e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1481 - - gmx:100814471 608.986