Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1416 ATGGCAACCATACACTTCAATATTCTTTCTATCTTGCTTCTCATAGTTGCATTCTCTTATACAGAAGCTGATTATAATATTGTTCCAAAAACAACAGAGAAGAAAATAGAGGTGGTGGTGGAATCCATAGTGTACTGTCAAAGTTGTAAGCACCTTGGAACATGGTCATTGAATGGAGCAAAGCCAATTCCTTCAGCAAAAGTAAGTGTAACCTGCAATAGCCATAAGGGTCATGTTAGCTACTACAAGGTCTTTGAGACAGATAAAAATGGTTACCTATATGCACCACTTGAAGGGTTCAAGATGGAGAATTATCTACTTGATCATCCTCTGCACTCTTGTTATGTTAAGCCTATTTGGTCCCCGCTTGAGAATTGCAACCTTCTCTCAAATTTGAATTATGGTCTGAATGGCGCTTCGCTTCGATTCGAGAACAAGAGATTGCGTGGAAGCAAATATGAGGCAGCTATCTATGCTGCAGGACCCTTGGCTTTCCGTCCCTCTGACTGTGCCCAGGTTCACTATTAG 528 0.411 MATIHFNILSILLLIVAFSYTEADYNIVPKTTEKKIEVVVESIVYCQSCKHLGTWSLNGAKPIPSAKVSVTCNSHKGHVSYYKVFETDKNGYLYAPLEGFKMENYLLDHPLHSCYVKPIWSPLENCNLLSNLNYGLNGASLRFENKRLRGSKYEAAIYAAGPLAFRPSDCAQVHY* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1416 175 PANTHER OS01G0164075 PROTEIN 6 171 - -
Amo20g1416 175 PANTHER NON-CLASSICAL ARABINOGALACTAN PROTEIN 30-LIKE 6 171 - -
Amo20g1416 175 Pfam Pollen protein Ole e 1 like 40 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1416 Amo-Chr20 31704066 31704593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1416 - - gmx:100782212 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1416 20 31704066 31704593 Amo20g1416 20 31704066 31704593 ECH
Amo20g1416 20 31704066 31704593 Amo10g0946 10 15918170 15918697 hybridization