Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1326 ATGGGGAAATCATTTCAATCTTTTTCTCCTCTTCGGATTGTGTCATCTGTAAAGTCGCAACGCCCAAGGCTGACGCAACCGCCCAAACCATCCCCGTCTCAATCTCCCACTAAGGAGCACCAACGGACGCCCCTCGCCGCGGTGGTTGCCGACTGTGCAAGGCGGTGGTTCCATGAGACACTCCAGGAGGCCAAGGCTGGCGACGCCGCCATGCAGGTTCTCGTTGGACAGATGTATTACAGTGGCTATGGCGTTCCTAGAAATCCGAAGAAGGGGTATGATTGGATTAGTAGAGTATCCAGAATTCGGAGCTCAGTTTGGAAAGTGAACAAAAAGCGTCCAGGTTACAGAGCAAGTGATTCAGATTCATGTGAACCGGAGGTCAAAACGAAATCTTGTCGTTAA 405 0.5111 MGKSFQSFSPLRIVSSVKSQRPRLTQPPKPSPSQSPTKEHQRTPLAAVVADCARRWFHETLQEAKAGDAAMQVLVGQMYYSGYGVPRNPKKGYDWISRVSRIRSSVWKVNKKRPGYRASDSDSCEPEVKTKSCR* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1326 134 MobiDBLite consensus disorder prediction 1 24 - -
Amo20g1326 134 MobiDBLite consensus disorder prediction 112 134 - -
Amo20g1326 134 PANTHER EXPRESSED PROTEIN 27 131 - -
Amo20g1326 134 SUPERFAMILY HCP-like 55 100 - -
Amo20g1326 134 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 27 131 - -
Amo20g1326 134 MobiDBLite consensus disorder prediction 1 44 - -
Amo20g1326 134 Gene3D Tetratricopeptide repeat domain 32 105 IPR011990 GO:0005515
Amo20g1326 134 SMART sel1 69 104 IPR006597 -
Amo20g1326 134 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1326 Amo-Chr20 28129867 28132648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1326 - - adu:107469327 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1326 20 28129867 28132648 Amo20g1326 20 28129867 28132648 ECH
Amo20g1326 20 28129867 28132648 Amo10g0885 10 14389113 14392336 hybridization