Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1245 ATGGAATCTACAACCTTCGCCAGTTTCAGAGCCTCTTCTCCTCATTCGATGCAACAACCTTATCTTCTGAGACCCTCTCCTTTACCCTCTCACCTTCGAATTTTGAAATTGAGGCGTTTTGGTTTGGATAAGAATCGTTTAGTTGCTCGTTGCTCTTCTGGTTCCGATGAATTTGTTCCTTTCAATGGGTTGCACTTCGCACCGAACAAGCTCTTCAGGCAGGAGGCTATTGGAGCTGAATATGGGGAAGGCTTTGAGACTTTCAGGACGGATGGACCATTGCAAGTTGATGTGGACTACTTGAATGACAAGTTGCAAGATGGTTTTCTTCAGCGCATTCGCTATGCCATGAAGCCGGATGAAGCCTATGGTCTTATCTTCTCTTGGGACAATGTGGTGGCTGATACCCGAGCTCTGAAGAGGAAGGCGTGGAAGGAGCTGGCCTTGGAAGAAGGAAAGGATATTCCTGAAGATGATGATATGCAAAGATTGGCACTTTATGCAGGTGTTGATGATGTGTTGCATAAGCATTTCCTCTCAGACAAGGCAGAAAATGAGATGGAGAGACTAAAGTTAAGGTTTTCTCAGTTATATTATGATAATCTTCTAAAGCTTGAAAGACCAATGGAGGGCCTCAGAGACTGGTTGGAAGCAGTTCATACAGCTCGAATTCCTTGTGCTGTTGTTTCAAGTCTTGATAGAAAAAATATGGTAGAAGCTTTGGAAAGGATGGAGCTCAACAAATATTTCCAGGCAGTTGTGACGGAAGAGGATGGAATGGAATCAATAGCTCATAGATTTCTTTCTGCTGCCGTCAAGCTTGATCGGAAACCCTCGAAGTGTGTTGTTTTTGAAGATGATCCTCGAGGAGTAACTGCTGCACACAATTGTACGATGATGGCTGTTGCATTAATTGGTGCTCATCCAGCGTATGATTTGGGGCAGGCTGATCTTGCAGTTGCTAACTTTGGTGAACTTTCTGTGATAAACTTGAGAAGATTATTTGCTAACAAGGGTTCTACGTTTATGGACCTGCAGAAGCAGATCATAGAGAAAGCTCCTCAGAAAAGGAAACTTACAATAGACACCATTTTCTAA 1098 0.4335 MESTTFASFRASSPHSMQQPYLLRPSPLPSHLRILKLRRFGLDKNRLVARCSSGSDEFVPFNGLHFAPNKLFRQEAIGAEYGEGFETFRTDGPLQVDVDYLNDKLQDGFLQRIRYAMKPDEAYGLIFSWDNVVADTRALKRKAWKELALEEGKDIPEDDDMQRLALYAGVDDVLHKHFLSDKAENEMERLKLRFSQLYYDNLLKLERPMEGLRDWLEAVHTARIPCAVVSSLDRKNMVEALERMELNKYFQAVVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAHPAYDLGQADLAVANFGELSVINLRRLFANKGSTFMDLQKQIIEKAPQKRKLTIDTIF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1245 365 Gene3D Putative phosphatase; domain 2 135 208 IPR023198 -
Amo20g1245 365 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 365 - -
Amo20g1245 365 CDD HAD_BPGM-like 124 306 - -
Amo20g1245 365 Gene3D - 125 320 IPR023214 -
Amo20g1245 365 SUPERFAMILY HAD-like 97 326 IPR036412 -
Amo20g1245 365 Pfam Haloacid dehalogenase-like hydrolase 125 303 IPR041492 -
Amo20g1245 365 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 365 - -
Amo20g1245 365 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 188 302 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1245 Amo-Chr20 26007342 26011781 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1245 - - gmx:100817685 587.03