Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1193 ATGTTTATCGAGAAGTTTAAGGTTGAGAGTCCTAATGTGAAGTACAGTGAGGATGAGATTGAGTCCGTGTACAACTACGAAACCACGGAGCTTGTTCATGAGAACAGGAATGGTTCTTATCAATGGATTGTTAAACCCAAAACCGTCAAATACGAATTCAAGACCAACACCCATGTCCCTAAATTGGGTGTAATGCTTGTTGGGTGGGGTGGAAACAATGGCAGCACACTCACTGGTGGCGTTATTGCAAACCGAGAGGGAATTTCATGGGCAACGAAGGACAAGATCCAACAAGCGAATTACTTTGGGTCTCTGACTCAAGCCTCTGCTATCAGAGTGGGGTCTTACCAAGGAGAGGAAATTTATGCCCCATTCAAGAGCCTCCTCCCTATGGTTAACCCCGACAACATTGTGTTTGGTGGATGGGATATCAGCAAGATGAACCTGGCAGATGCCATGGCAAGGGCCAAGGTATTCGACATCGATTTGCAGAAGCAGTTGAGGCCTTACATGGAATCCATGGTTCCACTCCCTGGAATCTATGACCAAGATTTCATTGCTGCTAACCAAGAAGCGCGCGCTGACAACGTCATCAAGGGCACTAAGAAGGAACAGATTCAGCAGATCATCAAGGACATTAAGGAATTTAAGGAACAGAACAAAGTCGATAGGGTGGTTGTCCTGTGGACCGCCAACACCGAGAGGTATAGCAATGTTGTTGTTGGTCTTAACGACACCATGGAGAACCTCATGGCTTCTGTGGACAAAAATGAGTCAGAGATCTCTCCTTCCACCTTGTTTGCAATTGCTTGTGTTATGGAGAATGTTCCTTTCATCAATGGAAGCCCTCAGAACACTTTTGTCCCAGGGCTAATTGATCTTGCCATCAGTAGGAACAGTTTGATTGGTGGAGATGATTTCAAGAGTGGCCAAACCAAAATGAAATCTGTATTGGTTGATTTCCTTGTTGGTGCTGGTATCAAGCCAACATCGATAGTGAGTTACAACCATCTTGGAAATAATGATGGTATGAATCTCTCAGCCCCACAAACCTTTCGATCAAAGGAAATCTCCAAGAGCAACGTTGTTGATGATATGGTCAACAGCAATGCCATCCTCTATGAGCCTGGCGAGCACCCGGACCACGTTGTCGTGATTAAGTATGTTCCTTATGTTGGGGACAGCAAGAGGGCCATGGATGAGTACACATCGGAGATATTCATGGGCGGAAAGAACACAATCGTGTTGCACAACACCTGTGAGGATTCCCTCTTGGCTGCTCCTATTATCTTGGACTTGGTCCTTCTTGCTGAGCTTAGCACTCGAATTCAGTTCAAATCCGAAGCTGAGGGCAAGTTCCACTCATTCCACCCGGTCGCAACCATCCTGAGTTATTTGACCAAGGCCCCTTTGGTTCCACCGGGCACGCCAGTGGTGAATGCATTGTCGAAGCAGCGAGCAATGTTGGAAAACATAATGAGAGCTTGTGTTGGTTTGGCACCGGAGAACAACATGATTCTAGAGTACAAGTGA 1533 0.4625 MFIEKFKVESPNVKYSEDEIESVYNYETTELVHENRNGSYQWIVKPKTVKYEFKTNTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASAIRVGSYQGEEIYAPFKSLLPMVNPDNIVFGGWDISKMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDQDFIAANQEARADNVIKGTKKEQIQQIIKDIKEFKEQNKVDRVVVLWTANTERYSNVVVGLNDTMENLMASVDKNESEISPSTLFAIACVMENVPFINGSPQNTFVPGLIDLAISRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKSEAEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENIMRACVGLAPENNMILEYK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1193 510 Gene3D - 1 356 - -
Amo20g1193 510 Gene3D - 381 510 - -
Amo20g1193 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Amo20g1193 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Amo20g1193 510 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 510 - -
Amo20g1193 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Amo20g1193 510 Coils Coil 506 510 - -
Amo20g1193 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
Amo20g1193 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
Amo20g1193 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1193 Amo-Chr20 23421639 23425650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1193 K01858 - gmx:106797152 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo03g2983 03 122046985 122050485 Amo20g1193 20 23421639 23425650 PCT