Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1153 ATGGATTCGGGCAACAGTACCGCTGGGAGCATGCAGTCCTCAAGTAGTGGTGCTCCTGCTGATGAAGATTCGTACGACTCACACTCACACTCACACTCACGCGCCCAACAACAACCCCATCATCATCATATTCCAAATCAGTTATCAACAACAACCACCACCCTTCACCACACCCACGCCCCTATCTTTGATCCTTTGTTATCATCATCATCATCAACAACTTCAACAACCTTCTTGGATCCATCATCATCTTCAATTCAAAGATCAAATCCAACAATAGTAAACAACCTCGACATGCCGTGGTACATCACACCGAGATCCGGACTCGACCAACCGGATCTTTCCACCGTCATGCCGCAATTCGCTGTTCCACCACCACCGCCGCCGCCGCAGCTACCACCGTTGCTGCAGCAACAACAACAAGAAGAAGCGCGCAGCAACGCAAACAGTAACAGCACGGTGGTTCGGAACCCGAAGAAGAGGTCAAGGGCTTCACGGCGAGCACCAACGACGGTTTTAACAACGGACACCACGAATTTCCGAGCTATGGTTCAAGAATTCACTGGTATTCCAGCACAGCCCTTCACTTCTTCTTCTTCTTCTCCTTTTCCAAGAACAAGGTTGGATCTCTTTGTTGGTGGCGGTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTTCTGGTGCTGGTCCTCCTTATCTTCTTCGTCCATTTGCGCAGAAAGTTCCTCTACCGTCGTCGTTTCCTCAAACCAATTATAATTCTTCACCTTCTTCTTCGTTATCTTTTCCACCTTCTTCTTCCATGGTGATGAACAACATATTATTTGTTCCTAATTCTAACAATCCAATTAATAACAGCTACCAACAACTTTCTTCTTCTTCTTCTTCGCCCCTTGGGCTTTTGAAACAGCATCAGCATCTTAATAATGTGAACTTGAACAACATGCAAAACAACAACAACAACCCTGCATCGATTCTGAGCTTTCAATCGATTCTTCAAGCACAACAAATTAGGTACCCTTCTCCTTCTCCTTCTCCTTCAACTTCTCCCCTTGTTGCATCGAAGGATCAAGAAACCTGCTTGGAGATTCCTCATCATCATAATCAGAGTAATAATAGTGGCACTGTTGACTCACATCTCAGAATGGGTGTGTTGGAGGAACAACTAGGATTCACTCATGCGCATGTTAGCACCACCACGAACATCAGCAATGGAGGAGTGTTAGAGAAGGGAAGAACCGAAGGTATGGTGGAGTCATGGATCAATTGTTCTTCTGATTAA 1281 0.4598 MDSGNSTAGSMQSSSSGAPADEDSYDSHSHSHSRAQQQPHHHHIPNQLSTTTTTLHHTHAPIFDPLLSSSSSTTSTTFLDPSSSSIQRSNPTIVNNLDMPWYITPRSGLDQPDLSTVMPQFAVPPPPPPPQLPPLLQQQQQEEARSNANSNSTVVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAQPFTSSSSSPFPRTRLDLFVGGGSSSSAAAAAASGAGPPYLLRPFAQKVPLPSSFPQTNYNSSPSSSLSFPPSSSMVMNNILFVPNSNNPINNSYQQLSSSSSSPLGLLKQHQHLNNVNLNNMQNNNNNPASILSFQSILQAQQIRYPSPSPSPSTSPLVASKDQETCLEIPHHHNQSNNSGTVDSHLRMGVLEEQLGFTHAHVSTTTNISNGGVLEKGRTEGMVESWINCSSD* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1153 426 MobiDBLite consensus disorder prediction 66 92 - -
Amo20g1153 426 MobiDBLite consensus disorder prediction 136 158 - -
Amo20g1153 426 MobiDBLite consensus disorder prediction 110 170 - -
Amo20g1153 426 Pfam VQ motif 167 194 IPR008889 -
Amo20g1153 426 MobiDBLite consensus disorder prediction 1 47 - -
Amo20g1153 426 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 423 IPR039609 -
Amo20g1153 426 MobiDBLite consensus disorder prediction 1 22 - -
Amo20g1153 426 MobiDBLite consensus disorder prediction 119 135 - -
Amo20g1153 426 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1153 Amo-Chr20 22158226 22160243 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1153 - - aip:107620295 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1153 20 22158226 22160243 Amo10g0710 10 9155471 9157030 hybridization