Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1044 ATGGCGGAGCTGAGACACCAAGCCTCCTTCGGCCCTCGCGCAACCTCTCCGATGAAGCGCGATGCCGATTCATCACCTCTCATCCCCTCCGCCACCGCGGACCACCATCACCACCACCTTCCCGACGACGACGAGGAACGCGACCGCCACTCCCTTAAGGACCGGTATCGTCCCCTACAGTATCTCTCTTCCTTCTTCGGCGATGACCCTAGGGTTCCCAATCCTCTCCATTCCCCAAGGATCTCATTCTTCTGCACCTTGCTTCTAATCCTCGTTGGCCTTCTCTCCCTCTTCTCAATCGTCAACAAATTGAATGCTCCTTACCTGTGTAAAAAGGATGGGATTACACTTCACTGCCCTCACGTGAAAGAATCGCCGTCTCTGTGGGAAAATCCTTTATCGTCCACGACGTCTTGGAAGCCTTGTGCTGAGCGCAGGGATGGTGTTATAGAAGAGCTTCCTCCTGAAAATGAAACAAATGGGTACATATTCATCCATGCTGAAGGTGGTCTAAACCAACAAAGAATTGCGATATGCAATGCCGTGGCTGTGGCCAAAATAATGAATGCCACACTTATTTTGCCTGTTTTGAAGCAAGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATAGATTACCTGAAATATGATGTTCGTATAGTCCGTGATATCCCAGAATGGTTTACTGATAAGACAGAGCTATTCAGTAGTATAAGGAGGACTGTAAAGAACATTCCAAAATATGCGCCTGCACAATTTTACATTGACAATGTTTTGCCTCGAGTCAAGGAGAAAAGGATTATGGCTCTAAAACCTTTTGTTGATAGGCTGGGATATGACAATGTTCCTCCAGAAATCAACAAGTTGAGATGTAGGGTTAATTATCATGCTCTGAAATTTCTCCCTGATATAGAGCAAATGGCTGATTTACTGGCCTCAAGGATGAGAAACCGAACTGGTAGTTCAAATCCTTATATGGCTCTGCATCTTCGATTTGAGAAAGGAATGGTAGGCCTATCGTTCTGTGATTTTGTGGGGACAAGAGAAGAGAAAGCTAAAATGGCAGAATACAGACAAAAGGAGTGGCCTCGACGGTATAAGAATGGTTCCCACTTATGGCAATTGGCTCTACAGAAGCGAAAGGAGGGACGGTGTCCTCTAGAGCCTGGAGAAGTGGCCGTTATACTTCGTGCTATGGGCTATCCAAAGGAAACACAAATTTATGTCGCTTCTGGACAAGTTTATGGTGGACAGAATCGGATGGCTCCGCTGAGGAATATGTTTCCTAATCTGGTTACAAAGGAGGAGTTGGCAACTAAAGAGGAGTTGGATGGTTTTAGAAAGCATGTGACGAGCCTTGCAGCTCTTGACTTCCTGGTATGCCTGAAGTCAGATGTGTTTGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATCATTGGCGCTCGTAGATACATGGGTCACCGTCTAAAATCAATCAAGCCTGACAAAGGATTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACCTTTGTTGAAGATGTGGTCGTTACTCATCAAACGCGGACAGGATTGCCGGAAGAAACTTTCCCCAACTATGACCTCTGGGAGAACCCCTTGACTCCTTGCATGTGCAAAGCCTGA 1677 0.4621 MAELRHQASFGPRATSPMKRDADSSPLIPSATADHHHHHLPDDDEERDRHSLKDRYRPLQYLSSFFGDDPRVPNPLHSPRISFFCTLLLILVGLLSLFSIVNKLNAPYLCKKDGITLHCPHVKESPSLWENPLSSTTSWKPCAERRDGVIEELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPEWFTDKTELFSSIRRTVKNIPKYAPAQFYIDNVLPRVKEKRIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAKMAEYRQKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCKA* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1044 558 MobiDBLite consensus disorder prediction 32 50 - -
Amo20g1044 558 PIRSF UCP009360 45 558 IPR024709 -
Amo20g1044 558 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 558 - -
Amo20g1044 558 Pfam GDP-fucose protein O-fucosyltransferase 162 494 IPR019378 -
Amo20g1044 558 CDD O-FucT_plant 162 497 IPR024709 -
Amo20g1044 558 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 558 - -
Amo20g1044 558 MobiDBLite consensus disorder prediction 1 50 - -
Amo20g1044 558 Gene3D - 304 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1044 Amo-Chr20 18483915 18489236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1044 128 557 Miscellaneous Gene Families AT1G22460 35.698 1.32e-93 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1044 - - gmx:100809112 1001.12