Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1011 ATGAAGCTCCAACAATTTCCCGCTAAGAATGTAGCAGTCACCATGTTAAACGGGATTCAAAATTCGAACACTCTTCAGGTGCTTTCAAAACCTAGATTTAGAAATGAGGAATTTATGGAAAAGATACTCAACAGAAGATGGACACTGCCAAGCCCTGAAACAAAGATTCATCAAGTTATAATACCTAGACATGGATCAGATGGTTGTAATTTCCTATTGAACACCGTTCCTGATTTAGGTCATGGCGCTAGGGATATGAAAAATAAAGGGAAATGTTTCTATGTGGTGCGTGACGATTTGTTGCACTCACTAATTAATGGCAACAAAGCAAGAAAGTTGGATGGGTTGATTCCCCTTATTGAAGACCATTCTGTGACTGATGTGGTTACATGTGGTGGTTGTCAAAGTGCTCATACAGCTGCTATTGCGGTTCTATGTGCTGAGAGAGGAATTGCATCACACCTGCTTCTGCGAGGAGAGCAGCCTGAAATCTTAACTGGCTATAACTTGATGTCTACATTATATGGAAATGTCACATATGTTCCGAGAAATATTTATGCCGACAGAGAAAACATGCTTAAGGACTATGCTAAGTCRKTGGCTGGTAACAGTGGTTCTGTCATTTCGTTTGGCRATATCACTCAAAATTCTTCAACAACAGAATTKTCTACTGCAAATTTGATGGAATTTGATGTAAGTAGAAGTGACAGAAACCTTCAACGGAAATTTTTAATTGTCAATGAAGGTGCAGGTGATTCTGTAGCTCTACTAGGTATGATTCGGTTAGTGCAATACTTATCACAGAGTCATTTACTTGGAAAAGAMAGGGCCTTGAAATTTGTTATAGATGCTGGAACTGGCACAACAGCTGTTGGTTTAGGACTTGCAGCCCTATGCTTAGGSCTTCCATGGGAGGTACATGCAGTCATGCTGGCTGACAAAATTGATGGATACAAACAACAGGAGGAWCGTTTGATTTCTGAATTCCAGAACCATTTTAATGTTCAGTTTAGTGACCACAACATAAATGAAGATGGTGGGATTGTGTATTGGGTGGAACGTGGTCGTCCAAGAAGATTTGGTAATGTTTTGGAAGGTGAGGTGGAAGCATGCCAACAAATTGCTCAGCAGACTGGGATTTTGGTGGATCCTGTTTACACATTGGCCGCTTGGGAAACAGCRATGCTCCTTTCTAGCAAAGAAGATGATAGAGAATCAGAAGTGGTGATGCTTCATACYGGTGGCACGTTGGGCATGTTTGGGTTGGCGCAAAGGTACAGGAATTACTTTGGCATGCTCCAGAAAGGACCCAAYTGTTCTTAA 1323 0.4089 MKLQQFPAKNVAVTMLNGIQNSNTLQVLSKPRFRNEEFMEKILNRRWTLPSPETKIHQVIIPRHGSDGCNFLLNTVPDLGHGARDMKNKGKCFYVVRDDLLHSLINGNKARKLDGLIPLIEDHSVTDVVTCGGCQSAHTAAIAVLCAERGIASHLLLRGEQPEILTGYNLMSTLYGNVTYVPRNIYADRENMLKDYAKSXAGNSGSVISFGXITQNSSTTEXSTANLMEFDVSRSDRNLQRKFLIVNEGAGDSVALLGMIRLVQYLSQSHLLGKXRALKFVIDAGTGTTAVGLGLAALCLGLPWEVHAVMLADKIDGYKQQEXRLISEFQNHFNVQFSDHNINEDGGIVYWVERGRPRRFGNVLEGEVEACQQIAQQTGILVDPVYTLAAWETAMLLSSKEDDRESEVVMLHTGGTLGMFGLAQRYRNYFGMLQKGPNCS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1011 440 Gene3D - 227 429 IPR036052 -
Amo20g1011 440 Gene3D - 108 200 IPR036052 -
Amo20g1011 440 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 90 427 IPR036052 -
Amo20g1011 440 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 18 435 IPR027278 -
Amo20g1011 440 Gene3D - 89 107 IPR036052 -
Amo20g1011 440 PANTHER D-CYSTEINE DESULFHYDRASE 2, MITOCHONDRIAL 18 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1011 Amo-Chr20 17831478 17835422 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1011 K05396 - gmx:100801680 595.119