Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0958 ATGGCAGCTGAATCGACCAGTTTTCTCTTTCGTTCGTTCTCCGCTCCCTCGGAAACTTCCACCGCCACTCAAGAGGGGGACTCCATGAGGGTACTTGGCGAATCTATTTCTTTTGGGAGGTTTTTGTCAGAAAGTCTGAATTGGGAGAGATGGTCATCGTTCACAAGCAATCGTTATGTGGAAGAAGCCGAGAAATATTCCAAGCCGGGTTCTGTTGCTGCGAAAAAGGCCTACTTCGAGGCTCATTACAAGAGGAAGGCTGCGGAGAAACAGGCTGTCTTGGCTCAAGAAGCTAATGAAGCTTCAGGAACTTTCAATTCAGAAACACTGGAATCAAATTGCAACGACTCATCAGATGTTGCCGAGTTAAGTGCCGATGCGATTGCGACTTCAGATGAACAGCCAGACAAAGAAGCTGATGATTGCCAAGTTATTATTGATTGTACCAGTAGAAATAACCTTGATGTTGGACAAAGTGATTCAGGCATTTCCAATGTGCATGGAGAAGGGGACGGGTCGTATACTCACGTTATTACAAACGAAAGTTGTGTCATTACTGATGATTCTAACCAGCATGATCAAATTGAAATCCATCAGAATATTGCTCTCCCTGGAGAAGAGAAGAAGTCTGATCATGGTGTCGCTGATCCTAGAAGTGGAATAAAAAAGAAGTCAATCAGCATCTTGACTAAGAATCGTAGGCAAACTTCACAGTCACTCCACATGTCAATCAATCTTTCCTCGGGCAATGGTGAAACAAGCAAAACAGATGCACAATCCAGAAATGGCGTAAACAGCACCTTGAAAAGTAAGAAGGCTGTTGAAGTTTCAATTGAGAAGAAGAGACTAACCGGTCCTTCTGGTGCCAATAAAACAAGTATGACAGCTACTGCTACTGCAGCTGTTAAACCTAGACCTGAAAATCACACATTGAAGGGTATGAAGCCAGGCGGAGGCTCTGTGGAGAAGAGACCAACTTCGAGCTCACTCCGTAGATCACTCAATCTCCCTTCTAGCACAGGCAAAGCAACTGAAATGGCTTCAGTGTTTGATAAAAGAATTGAAAGGAATCATTGTAGTTTGCGCAATATTCCCAAAGTTCGTCCACTGGCATCTAACATATCAACTAAGTTGTCTTATGATTTCTCGAATCAAGATTCAGAAAATCCACCTTATCCAGGAAGAAGGACTGAAGAGGTACTTAAATCTGTGTCTAGAGGTGTTGCTGCGAATGTGAAACTTCCCTCTGCCTCTTCTGAATGCATGAAATCTTCTAGCAGCAACAAAATTATTCATCGACCCCCTACCATGTCATCACCGTTTAGATTTAGAAGTGAAGAAAGAGCAGTAAAACGCAAAGAGTTCCTTGAAAGGGTGTATGGAATCAAAAACAAAGTTGAGAAAATTCAGTTTCAAAGGACACCTGAGCAGAATAACATAAAGCATGATTTCAAGCTGGGGCAGAGCAGTGGCTCTAAACCCAAACTAAATGAGGACGGGCATGGTGCATCGTGCTCGCCTAGTAATCAGATCCAAAAGACCTCAGTGACACATAAAAGCTTTGGAAATTCATGGAAGCCTCCAATCAGCACCAACAATTCCAATCGTGCTACAGAAAAACTCAACCGATCAACAAGGAACTCAGTAACTTCAATGACAAAGATCACACGAGAAAATGCTTCTCCAAATATTCAGCATTGA 1701 0.428 MAAESTSFLFRSFSAPSETSTATQEGDSMRVLGESISFGRFLSESLNWERWSSFTSNRYVEEAEKYSKPGSVAAKKAYFEAHYKRKAAEKQAVLAQEANEASGTFNSETLESNCNDSSDVAELSADAIATSDEQPDKEADDCQVIIDCTSRNNLDVGQSDSGISNVHGEGDGSYTHVITNESCVITDDSNQHDQIEIHQNIALPGEEKKSDHGVADPRSGIKKKSISILTKNRRQTSQSLHMSINLSSGNGETSKTDAQSRNGVNSTLKSKKAVEVSIEKKRLTGPSGANKTSMTATATAAVKPRPENHTLKGMKPGGGSVEKRPTSSSLRRSLNLPSSTGKATEMASVFDKRIERNHCSLRNIPKVRPLASNISTKLSYDFSNQDSENPPYPGRRTEEVLKSVSRGVAANVKLPSASSECMKSSSSNKIIHRPPTMSSPFRFRSEERAVKRKEFLERVYGIKNKVEKIQFQRTPEQNNIKHDFKLGQSSGSKPKLNEDGHGASCSPSNQIQKTSVTHKSFGNSWKPPISTNNSNRATEKLNRSTRNSVTSMTKITRENASPNIQH* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0958 566 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 270 566 - -
Amo20g0958 566 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 4 217 - -
Amo20g0958 566 MobiDBLite consensus disorder prediction 474 566 - -
Amo20g0958 566 MobiDBLite consensus disorder prediction 419 439 - -
Amo20g0958 566 MobiDBLite consensus disorder prediction 205 344 - -
Amo20g0958 566 MobiDBLite consensus disorder prediction 502 566 - -
Amo20g0958 566 MobiDBLite consensus disorder prediction 474 495 - -
Amo20g0958 566 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 270 566 IPR044216 -
Amo20g0958 566 MobiDBLite consensus disorder prediction 419 434 - -
Amo20g0958 566 MobiDBLite consensus disorder prediction 322 344 - -
Amo20g0958 566 MobiDBLite consensus disorder prediction 230 272 - -
Amo20g0958 566 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 4 217 IPR044216 -
Amo20g0958 566 MobiDBLite consensus disorder prediction 205 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0958 Amo-Chr20 16174049 16177676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0958 - - ahf:112715076 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0958 20 16174049 16177676 Amo20g0958 20 16174049 16177676 ECH
Amo20g0958 20 16174049 16177676 Amo10g0528 10 5610257 5614668 hybridization