Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0954 ATGGAAGTGGCGATGTCACTGAACGCGCTCGTACGGCTTCCTCCGTCGAGTTCAGCTTCAAGGCTCAACCTCCACGACGAAGCTTCAGCTTCACCAATTAGGCACTCTCTTTTTACTTCCCGAAATACCCCCAAGCCTCCTCAACGACGCAGCGCATTCTTCGTTGTTGAAGCCAAGGGTAAAAAGGGAATGATGGCTCGCCAGTATCAGCGACCCCCTCCTCCTCCCTTGCCCAAGCTCGAGGACGATGGAAACCCCAAATTCGTTATCTTCATTCGCATGGCTGACCTGTACATATGGTACCCTCTCAGCATAGTAACGGGTGGCACCACTGCCAAAATCATGGTTGCAGCAAAGGATAATTTTCTTGGCAAGTATATATACAAAGATACACTTGATAGAAATCTTGCAGCAGTTATTTACAAAGATGAGAAGGAGATACAGAAAACTGCATTCAAGCAGCATGCTGTGCTGCGGGACGCCACTGATTTCAGATACGGCTACAAACTTGTTGAGAATAACAATATAAGAGCTGCACTTTCTACGTCGGATGTTGTTGAGCTTCCAACACCGGATAAGCTAAAAACCGTACTTGATAAAGTGAAAGACTTCTTTGGAGATGCAAAGGAGTCCTTTGGAAAGATAACGGCCTTGGGCTCTACTGAAACTGAGGAGTCTGAGGGAGGTACAAAAGAAAAGTCCAAGGTTAAAGGATGA 717 0.4658 MEVAMSLNALVRLPPSSSASRLNLHDEASASPIRHSLFTSRNTPKPPQRRSAFFVVEAKGKKGMMARQYQRPPPPPLPKLEDDGNPKFVIFIRMADLYIWYPLSIVTGGTTAKIMVAAKDNFLGKYIYKDTLDRNLAAVIYKDEKEIQKTAFKQHAVLRDATDFRYGYKLVENNNIRAALSTSDVVELPTPDKLKTVLDKVKDFFGDAKESFGKITALGSTETEESEGGTKEKSKVKG* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0954 238 MobiDBLite consensus disorder prediction 219 238 - -
Amo20g0954 238 PANTHER PROTEIN HHL1 CHLOROPLASTIC 1 234 IPR045388 -
Amo20g0954 238 Pfam Protein HHL1-like 69 205 IPR045388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0954 Amo-Chr20 15910108 15913683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0954 - - adu:107468935 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0954 20 15910108 15913683 Amo20g0954 20 15910108 15913683 ECH
Amo20g0954 20 15910108 15913683 Amo10g0526 10 5478032 5481216 hybridization