Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0951 ATGTTCAAGCAGATATTTAAACTCCCTAAAAAGTCGTCCAAAAATTCGGAGAATCGAGAACACGGTGGTGGAAGCAGCACAAGTGGAAGAAGCCATGGTGGTGGTGTTGGTTCCAAAAACAGTGATCTTGTTCCTCCTGGGGGAAGCAAAACTGGGAATTCTTCAGTGTTGCAGCCCCAACATCACCCTGCTTTGAARTCCGGTCAGCACCATGGGAATCGGGTTCAATTGCCGTTGGCCGCAGGCGAAAACCCCAATGGGAATTTGAGTGCATATGAGGTACCTTTGGCTGCATTCAGGGARGTTCCCAATTCGGAGAAGCCAGGATTGTTCATCAAGAAGCTCAGGATGTGCAGTGTTGTGTTTGACTTTACTGACCCCACGAAGCACCTAAAGGAAAAGGAAATCAAGAGGCAGGCTTTGGTGGAATTGGTGGATTATGTGACTTCTGCCAATGCTAAGTTTTCGGAATCTATGATACAAGAGGTTGTTAAAACCGTGTCTGCTAATATATTCAGGACGCTTAGCCCTCAGCCTCGTGAGAACAAGCTTGTTGATGGTGTTGATGTGGAGGAGGAGGAGCCATCAATGGATCCTGCGTGGCCTCATTTGCAAATCGTGTATGAGCTTTTTCTGAGATTTGTGGCTTCGCCGGAGCTGGATGCGAAGTTGGCTAAGAGATTCATTGATCAATCTTTCATTTTGAGGCTGCTGGATTTGTTTGACTCTGAGGATCCTAGAGAACGTGAATACTTGAAGATGACCTTGCATCGCATCTACGGGAAGTTCATGGCGCATCGCCCTTTCATCAGGAAATCCATCAATAATATCTTTTACAATTTTATTTTTGAATCCGAGAAGCATAATGGGATTGCTGAGTTCTTGGAAATTCTGGGGAGCATCATTAATGGTTTCGCGCTACCATTGAAAGAAGAGCATAAATTGTTTCTTGTTCGTGTGTTGATTCCACTGCACAAACCAAAGTGCTTAGCAATGTATCATCAGCAGTTATCTTATTGCATTACTCAATTTGTGGAGAAAGATTGCAAGCTTGCTGATACTATTATTAGGGGACTATTGAAGTACTGGCCGATAACCAATAGTTCCAAGGAAGTTATGTTCCTGAGTGAGCTAGAAGAAGTTCTAGAAGCAACTCAACCTCCAGAGTTCCAGCGTTGTATGATGCCATTATTTCGCCGCATCGCCCATTGTTTAAACAGCCCCCATTTTCAGGTGGCCGAAAGAGCTTTGTTCTTATGGAACAACGATCACATCGTGAACTTAATCAAACAAAACCGCAAAGTGATACTGCCCATCATCTTCCCGGCGTTGGAGCGAAACGCTAGAAGCCACTGGAATCAGGCTGTCCATAGTTTGACGTTAAACGTGCGGAAGATATTCAATGATCTTGATCCTGACTTGTCGAAAGAATGCTTACAGAAGTTTGAGGAGGATATATTGAAGGAAGACGCAGTCACGGCAGGGCGTGAGGCCACGTGGAAACGGTTAGAGGAGCTTGCCGCGAAGAAAGCTGCGAGCAACGAATCAGTGCTTGTTGGTAAGGTCGCTGCTATGCAGGTTAGATAG 1587 0.4512 MFKQIFKLPKKSSKNSENREHGGGSSTSGRSHGGGVGSKNSDLVPPGGSKTGNSSVLQPQHHPALKSGQHHGNRVQLPLAAGENPNGNLSAYEVPLAAFREVPNSEKPGLFIKKLRMCSVVFDFTDPTKHLKEKEIKRQALVELVDYVTSANAKFSESMIQEVVKTVSANIFRTLSPQPRENKLVDGVDVEEEEPSMDPAWPHLQIVYELFLRFVASPELDAKLAKRFIDQSFILRLLDLFDSEDPREREYLKMTLHRIYGKFMAHRPFIRKSINNIFYNFIFESEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRVLIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLSELEEVLEATQPPEFQRCMMPLFRRIAHCLNSPHFQVAERALFLWNNDHIVNLIKQNRKVILPIIFPALERNARSHWNQAVHSLTLNVRKIFNDLDPDLSKECLQKFEEDILKEDAVTAGREATWKRLEELAAKKAASNESVLVGKVAAMQVR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0951 528 MobiDBLite consensus disorder prediction 1 72 - -
Amo20g0951 528 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 98 507 IPR002554 GO:0000159|GO:0007165|GO:0019888
Amo20g0951 528 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 524 IPR002554 GO:0000159|GO:0007165|GO:0019888
Amo20g0951 528 PIRSF PP2A_B56 2 526 IPR002554 GO:0000159|GO:0007165|GO:0019888
Amo20g0951 528 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 524 - -
Amo20g0951 528 MobiDBLite consensus disorder prediction 19 35 - -
Amo20g0951 528 MobiDBLite consensus disorder prediction 44 62 - -
Amo20g0951 528 Gene3D - 103 506 IPR011989 -
Amo20g0951 528 SUPERFAMILY ARM repeat 109 489 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0951 Amo-Chr20 15866219 15871898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0951 K11584 - gmx:100811438 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0951 20 15866219 15871898 Amo20g0951 20 15866219 15871898 ECH
Amo20g0951 20 15866219 15871898 Amo10g0523 10 5436998 5442368 hybridization