Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0935 ATGGCCGCCAACAGATGGTTGAAGCCTGAGGTATACCCTCTCTTTGCCTCAGTTGGTGTGGCCGTTGGAATTTGCGCTATGCAACTTGTTAGGAACATAACAACCAACCCTGAAGTCAGGGTACTAAAAGAYAAAAGAAGTGCAGGAATTCTTGAGAATTTTGAAGAGGGTGAGAAGTATTCACAGCACACCGTTAGGAAGTTCGTCCGCAACAAGACGCCCCAGATCATGCCATCTATTAACAAATTCTTCTCCGATCCAAACTAYAWWKWTMGSRRRWYMTTTTRKAACAAAGAAGAAKAAAAYAYAAYAMWRTRWWSAKRWTTTTTTTRRCATTTTTGGCTTTTAATTTCCAGTGCTGTGGATTATTGA 372 0.3683 MAANRWLKPEVYPLFASVGVAVGICAMQLVRNITTNPEVRVLKDKRSAGILENFEEGEKYSQHTVRKFVRNKTPQIMPSINKFFSDPNYXXXXXFXNKEEXNXXXXXXFFXHFWLLISSAVDY* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0935 123 Pfam NADH-ubiquinone reductase complex 1 MLRQ subunit 8 75 IPR010530 -
Amo20g0935 123 PANTHER G-BOX BINDING PROTEIN 2 88 - -
Amo20g0935 123 PANTHER OS07G0274700 PROTEIN 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0935 Amo-Chr20 15614858 15615716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0935 - - qsu:111985483 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0935 20 15614858 15615716 Amo20g0935 20 15614858 15615716 ECH
Amo20g0935 20 15614858 15615716 Amo10g0513 10 5229744 5231170 hybridization