Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0930 TTTTTAACCCCTCGGCCAAAGGAAGTCGTTTTGGATTTAAGGAAAAAAAAAAAAGGCCCTAAGCCTAATCTTCGAAGAAGCCCCCCAACATACTCTCTCACACTCACAGCACAGAGGCAGAGCTTTCCTCAACCTTCTCTATCAGCGCGTCTCGCCGGCCCATCTCGTCGCCGCCGCTCGCCAGCCCCTCTGCGTCACCGCGCCGTCTCGTTGCTCGCCCTCACTGCTCACTGCTGCCTCCATCTCTACTCGCCCTCTGCCCTATTCTCTTGTCTCCTCTGCCTCCCTCTTCTCTTCTCTGGCTCGGTTCTCTCCCTCTGCGTGCGGCTAAGGCCCACATATAGACATTCCAAACACCCTATCAGTGTGCACTGTACAATGTGGGCAGCCCTACAAGCTCGAGCATCGGTTTCGTCCTGGTGGCTTTCTTCACGGCAATGGAAGCTAGCATTTTCATCTTCCTCTTCTGCCGTTGATGCCGTTGGAAAATGCACCCTTGATCTTCACGAGATTGAGAAGGTTCTAATGGATGTTAAAGCTGACGACGTTAAGGTTATACCGTCTCCCAAGCACTGTGATTGGGCTGATTTCATGGTTCTAGCAACCGGCAGGTCCACGTGGCATGTCAAGAACATTGCTCAAGCTCTAATTTACCAGGCTAAGCAGAAGCAAAAAGGTGCAGACCGAATGATGCTACCTAGTGTGGAAGGTCAAGCAGGAGGAAAGTGGATTGTAATTGACTCTGGTAAAGTGATAGTTCATGCACTTGATGAAAAGGCTAGAGCTTACTACAATTTGGAAGGACTTTGGACAAGCCCAGAGAGATTGCGAAACGAACCTATTGAGGATTTACATTTACAAAATGCTTTGGTGAAGATTCGCCGGAAAAATAACTCGAAGAAACCTGCACAAAGGAATGCTTAA 924 0.4924 FLTPRPKEVVLDLRKKKKGPKPNLRRSPPTYSLTLTAQRQSFPQPSLSARLAGPSRRRRSPAPLRHRAVSLLALTAHCCLHLYSPSALFSCLLCLPLLFSGSVLSLCVRLRPTYRHSKHPISVHCTMWAALQARASVSSWWLSSRQWKLAFSSSSSAVDAVGKCTLDLHEIEKVLMDVKADDVKVIPSPKHCDWADFMVLATGRSTWHVKNIAQALIYQAKQKQKGADRMMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTSPERLRNEPIEDLHLQNALVKIRRKNNSKKPAQRNA* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0930 307 MobiDBLite consensus disorder prediction 39 62 - -
Amo20g0930 307 MobiDBLite consensus disorder prediction 11 30 - -
Amo20g0930 307 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 169 270 IPR004394 -
Amo20g0930 307 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 151 298 - -
Amo20g0930 307 PANTHER IOJAP SUPERFAMILY ORTHOLOG 151 298 IPR004394 -
Amo20g0930 307 Gene3D Beta Polymerase, domain 2 166 280 IPR043519 -
Amo20g0930 307 Pfam Ribosomal silencing factor during starvation 170 270 - -
Amo20g0930 307 Hamap Ribosomal silencing factor RsfS [rsfS]. 154 271 IPR004394 -
Amo20g0930 307 SUPERFAMILY Nucleotidyltransferase 169 278 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0930 Amo-Chr20 15496095 15500220 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0930 - - gmx:100500659 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0930 20 15496095 15500220 Amo20g0930 20 15496095 15500220 ECH