Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0917 ATGGATGAAGCGTCAGGGTTTGGTGCTACGACGTCGTCTTCAATGTTTAGGAATTTCCCTCTCATATCGGCATTCGTTGCTTTCGCCTTAGCTCAATCCATCAAGTTTTTCACTACCTGGTACAAAGAGAGGAGATGGGATCCCAAGCAACTAGTTGGATCTGGGGGAATGCCGTCGTCTCATTCGGCTACTGTGACGGCTCTTGCAGCCGCCGTTGGGTTCCAGGATGGCTTTGGAGGACCACTTTTCGCTACAGCGTTGGTCTTAGCTTGCATTGTAATGTATGATGCTACTGGCGTAAGAATGCAAGCTGGGCGCCAAGCAGAGGTTTTGAACCAAATTGTTTATGAACTTCCTGCCGAACATCCTCTGGCTGAAAGCAGACCTCTTCGTGAACTTCTTGGGCATACACCCCCGCAGGTTGTCGCTGGTGGAATACTGGGACTTGTAACAGCGGTTATGGGTCGTCTAATAACAATGGCTTGGTAG 489 0.4969 MDEASGFGATTSSSMFRNFPLISAFVAFALAQSIKFFTTWYKERRWDPKQLVGSGGMPSSHSATVTALAAAVGFQDGFGGPLFATALVLACIVMYDATGVRMQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVVAGGILGLVTAVMGRLITMAW* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0917 162 PANTHER - 10 160 - -
Amo20g0917 162 Pfam Divergent PAP2 family 17 150 IPR003832 -
Amo20g0917 162 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 10 160 IPR003832 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0917 Amo-Chr20 15237810 15240173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0917 K09775 - gmx:100815344 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0917 20 15237810 15240173 Amo10g0488 10 4915743 4918743 hybridization