Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0844 ATGGCGTGCAGGTTTATGCTTCGTTCAGCTTTACTTGTGGAACCTTACCAATTGGAACATCTTCGTGGTTTCAATTCCAAGAACAGAGGAACTTTGCGATTCAGAACCGTTAGGGCTCAACGGTTTCACAGAGGAAGAACTCTTTGTTGCTCTCACAACGAAACGTCGTCGTCTTCGTCTCAGGACGATCAGGGTCCGCCTCAAGAAGCTGTTCTAAAAGCCATTTCAGAGGTGTCGAAGACAGAAGGGAGGGTTGGTCAAACTACGAACATGGTTATTGGAGGCACTGTGACTGATGATTCTACGAATGAGTGGCTCACTTTGGACCAGAAGGTGAACTCGTACCCAACTGTTCGAGGATTTACTGCAATAGGAACCGGAGGGGAGGACTTCGTGCAATCAATGGTTGTTGCCGTGGAATCTGTAATCCAACAGCCCATTCCTGAGGGACGAGTGAAGCAGAAGTTATCTGCTAGGGGCAAATATGTATCCGTAAATATCGGGCCTATCCAAGTTGTTTCTAGTGAACAGGTCCAAGCTGTATATAATGCCATGAGGAGAGATGACAGAATGAAATATTTTTTGTAA 588 0.4592 MACRFMLRSALLVEPYQLEHLRGFNSKNRGTLRFRTVRAQRFHRGRTLCCSHNETSSSSSQDDQGPPQEAVLKAISEVSKTEGRVGQTTNMVIGGTVTDDSTNEWLTLDQKVNSYPTVRGFTAIGTGGEDFVQSMVVAVESVIQQPIPEGRVKQKLSARGKYVSVNIGPIQVVSSEQVQAVYNAMRRDDRMKYFL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0844 195 Pfam Protein of unknown function (DUF493) 112 195 IPR007454 -
Amo20g0844 195 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 1 195 - -
Amo20g0844 195 SUPERFAMILY YbeD/HP0495-like 109 195 IPR027471 -
Amo20g0844 195 Gene3D - 108 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0844 Amo-Chr20 13111906 13115290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0844 - - gmx:100499928 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0844 20 13111906 13115290 Amo20g0844 20 13111906 13115290 ECH
Amo20g0844 20 13111906 13115290 Amo10g0396 10 3999898 4004263 hybridization