Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0842 ATGAGAAATAACAGGAATTCTCTACCAGAGAGAAGGTGGTTCCTAGGCCTGGCCATAGTGGGCCTGGTCGGAGCTGCAGTCTTCATAGTCGTAATGATCCTAACCTCCGACTCCTCCTTAATATGCCCGACGGAACCAATCTACGGTGAAATGCCCAAAGCCCAGGCCCGAGTCCAGGAAGACTACAACCCAACGACGATCCAGCTGAAGGCCATACTCCACTACGCCACGTCACGCATTGTCCCGCAACAATCTCTTGCAGAGATCAAGATCAGCTTCGACGTCCTCAAATCAATGGGCCGGCCATGCAACTTCCTGGTCTTCGGTCTGGGTCACGACTCCCTCATGTGGGCCTCCCTGAACCCGGGCGGAACAACTCTCTTCCTGGAAGAGGATCCTAAATGGGTTCAAACCGTACTCAAGGATGCCCCGTCCCTGCGGGCCCACACTGTCCGGTATCGCACGCGCCTAAGGGACGCGGACCAACTGCTCTTGTCTTACCGCTCCGAGCCCYCCTGCGGCCCGGKGGGGGCCCACTTACGTGACAARGTTGAGTGCGAGCTGGCTCTTCACAACCTCCCCGATCAGGTGTATGAGACYGAGTGGGATCTGGTGATGATCGACGCGCCTCGCGGATACTTCCCGGACGCGCCGGGGAGGATGGCGGCGGTGTACTCTGTGGCGGTCATGGCGAGAGGGAGAAAAGGATCCGGTGTGACGCACGTGTTCCTTCACGATGTTGATCGGAGGGTGGAGAAGGTTTATGCTGAGGAGTTTCTTTGTAGGAAGTATCTGGTGAGAGGTGTTGGCAGGCTTTGGCATTTCCAGATACCGCCTTCAAATGACTCTCATACTTCTCAACGTTTCTGTTAA 873 0.559 MRNNRNSLPERRWFLGLAIVGLVGAAVFIVVMILTSDSSLICPTEPIYGEMPKAQARVQEDYNPTTIQLKAILHYATSRIVPQQSLAEIKISFDVLKSMGRPCNFLVFGLGHDSLMWASLNPGGTTLFLEEDPKWVQTVLKDAPSLRAHTVRYRTRLRDADQLLLSYRSEPXCGPXGAHLRDKVECELALHNLPDQVYETEWDLVMIDAPRGYFPDAPGRMAAVYSVAVMARGRKGSGVTHVFLHDVDRRVEKVYAEEFLCRKYLVRGVGRLWHFQIPPSNDSHTSQRFC* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0842 290 PANTHER OS11G0490100 PROTEIN 3 290 IPR006514 GO:0045492
Amo20g0842 290 Gene3D Vaccinia Virus protein VP39 80 288 IPR029063 -
Amo20g0842 290 Pfam Polysaccharide biosynthesis 87 275 IPR021148 -
Amo20g0842 290 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 3 290 - -
Amo20g0842 290 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 69 290 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0842 Amo-Chr20 13086658 13087571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0842 - - gmx:100791951 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0842 20 13086658 13087571 Amo20g0842 20 13086658 13087571 ECH